RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CCNJQ5T5M9 372 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 GTF2IRD2BQ6EKJ0 949 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 VWA1Q6PCB0 445 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 PAMR1Q6UXH9 720 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 ESPNLQ6ZVH7 1005 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 BTLAQ7Z6A9 289 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 ZAR1Q86SH2 424 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 GTF2IRD2Q86UP8 949 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 OR8J2Q8NGG1 315 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 TSC22D3Q99576 134 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 PRRG4Q9BZD6 226 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 AKTIPQ9H8T0 292 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 ZNF226Q9NYT6 803 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 MCTS1Q9ULC4 181 aaKnown RBP12.12□□□□□ -0.47
HMGN1-211ENST00000471260 RAB26Q9ULW5 256 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 TEP1Q99973 2627 aaKnown RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 H3BNX3 289 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 SDHDO14521 159 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 GMFGO60234 142 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PDE5AO76074 875 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 RAF1P04049 648 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 HRGP04196 525 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 ELK4P28324 431 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 EIF1AXP47813 144 aaKnown RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 P2RX1P51575 399 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 RIPPLY3P57055 190 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 FAM27E3Q08E93 113 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 TRAP1Q12931 704 aaKnown RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 FLOT2Q14254 428 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 CD226Q15762 336 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 DPY19L1Q2PZI1 675 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 CTU2Q2VPK5 515 aaKnown RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 ZNF474Q6S9Z5 364 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 VPS37AQ8NEZ2 397 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 OR2V1Q8NHB1 315 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PHOSPHO1Q8TCT1 267 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 OIT3Q8WWZ8 545 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PYDC1Q8WXC3 89 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 CCDC124Q96CT7 223 aaKnown RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 ASB9Q96DX5 294 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 OTUB1Q96FW1 271 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 DUS3LQ96G46 650 aaKnown RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 GMPPAQ96IJ6 420 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 ADGRG7Q96K78 797 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 RNF145Q96MT1 663 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 LIME1Q9H400 295 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 FANCFQ9NPI8 374 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PLSCR4Q9NRQ2 329 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 PROCRQ9UNN8 238 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 EMC9Q9Y3B6 208 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 TESMINQ9Y4I5 508 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
HMGN1-211ENST00000471260 GPC6Q9Y625 555 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-211ENST00000471260 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 GJE1A6NN92 205 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 SHISA8B8ZZ34 492 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 NPIPB9F8W1W9 429 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 DENRO43583 198 aaKnown RBP12.1□□□□□ -0.47
HMGN1-211ENST00000471260 EIF4E2O60573 245 aaKnown RBP12.1□□□□□ -0.47
HMGN1-211ENST00000471260 AQP8O94778 261 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 SYNGR4O95473 234 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 AGR2O95994 175 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 C8BP07358 591 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 GUSBP08236 651 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
HMGN1-211ENST00000471260 POU2F1P14859 743 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 EPHA3P29320 983 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 UGT2B10P36537 528 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 MRPL19P49406 292 aaKnown RBP12.1□□□□□ -0.47
HMGN1-211ENST00000471260 SIRPAP78324 504 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 KEAP1Q14145 624 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 TRIP10Q15642 601 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 PGS1Q32NB8 556 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 ANXA8L1Q5VT79 327 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 OR6K3Q8NGY3 331 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 TESCQ96BS2 214 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 RCN3Q96D15 328 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 SH3YL1Q96HL8 342 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-211ENST00000471260 OR7D2Q96RA2 312 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 SDF2Q99470 211 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 DPY30Q9C005 99 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 TIGARQ9NQ88 270 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 ICAM5Q9UMF0 924 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 PLEKHA6Q9Y2H5 1048 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
HMGN1-211ENST00000471260 PRSS51A0A1B0GVH4 220 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 GTPBP1O00178 669 aaKnown RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 PLGP00747 810 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms