RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ACER3Q9NUN7 267 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 Q9UFV3 132 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 ADAM21Q9UKJ8 722 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 MBD3L4A6NDZ8 208 aaPredicted RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 MBD3L3A6NE82 208 aaPredicted RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 MBD3L5A6NJ08 208 aaPredicted RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 CLDN1O95832 211 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 PCBP3P57721 371 aaKnown RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 RAC1P63000 192 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 EPS8Q12929 822 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 SELENBP1Q13228 472 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 CTU2Q2VPK5 515 aaKnown RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 XKRXQ6PP77 449 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 PLEKHM3Q6ZWE6 761 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 CCDC71Q8IV32 467 aaPredicted RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF440Q8IYI8 595 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 C9orf106Q8NAJ2 232 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 TNIP2Q8NFZ5 429 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 MBD3L2Q8NHZ7 208 aaPredicted RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF563Q8TA94 476 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 TMEM234Q8WY98 164 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 CMTM5Q96DZ9 223 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 ADGRG7Q96K78 797 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 UCN2Q96RP3 112 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 GPATCH1Q9BRR8 931 aaKnown RBP17.78■□□□□ 0.44
HDAC7-220ENST00000471235 PIF1Q9H611 641 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 COQ3Q9NZJ6 369 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF232Q9UNY5 417 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 USP22Q9UPT9 525 aa17.78■□□□□ 0.44
HDAC7-220ENST00000471235 CFAP73A6NFT4 308 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 FAAHO00519 579 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 EIF1AYO14602 144 aaKnown RBP17.77■□□□□ 0.44
HDAC7-220ENST00000471235 DCTN3O75935 186 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 OPN1LWP04000 364 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 GKN3PP0CG01 181 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ME2P23368 584 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 PRKAR1BP31321 381 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 SFTPDP35247 375 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 TIMP3P35625 211 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 NUDT2P50583 147 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 EEFSECP57772 596 aaKnown RBP17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ZSWIM7Q19AV6 140 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 VMACQ2NL98 169 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 C8orf82Q6P1X6 216 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-220ENST00000471235 DHRS4L2Q6PKH6 230 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 HACD2Q6Y1H2 254 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ARPINQ7Z6K5 226 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 COMTD1Q86VU5 262 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 SLC30A8Q8IWU4 369 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ANKS4BQ8N8V4 417 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 NAXEQ8NCW5 288 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 OR10Q1Q8NGQ4 319 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF845Q96IR2 970 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF607Q96SK3 696 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 ECSITQ9BQ95 431 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 SPATA5L1Q9BVQ7 753 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 STOML1Q9UBI4 398 aa17.77■□□□□ 0.44
HDAC7-220ENST00000471235 A0A0J9YW62 118 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 FAM220BPB1ANY3 271 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 GCM2O75603 506 aaPredicted RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 GP1BBP13224 206 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 CHRNB4P30926 498 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 CEACAM8P31997 349 aaPredicted RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 ACAA2P42765 397 aaKnown RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 IDH2P48735 452 aaKnown RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 RPS3AP61247 264 aaKnown RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 MERTKQ12866 999 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 GKAP1Q5VSY0 366 aaPredicted RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 FAM91A1Q658Y4 838 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 LILRA2Q8N149 483 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 ASB5Q8WWX0 329 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 REXO5Q96IC2 774 aaKnown RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 KLHL15Q96M94 604 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 LRRC37BQ96QE4 947 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 PINK1Q9BXM7 581 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 ARMC7Q9H6L4 198 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 EFCAB1Q9HAE3 211 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 CMTM6Q9NX76 183 aa17.76■□□□□ 0.43
HDAC7-220ENST00000471235 UTP20O75691 2785 aaKnown RBP17.76■□□□□ 0.43
HDAC7-220ENST00000471235 CCT8L1PA6NM43 557 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 TNFSF11O14788 317 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 FRS3O43559 492 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 TPST1O60507 370 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 CLDN14O95500 239 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 PRG2P13727 222 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 UQCRBP14927 111 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 CPA2P48052 419 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 DMTNQ08495 405 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 C3orf33Q6P1S2 294 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 POMZP3Q6PJE2 187 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 ESPNLQ6ZVH7 1005 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 CHMP1BQ7LBR1 199 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 MAMDC2Q7Z304 686 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-220ENST00000471235 ZNF550Q7Z398 422 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 GRINAQ7Z429 371 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 LSRQ86X29 649 aaPredicted RBP17.75■□□□□ 0.43
HDAC7-220ENST00000471235 ARMC8Q8IUR7 673 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 ATP6V1C2Q8NEY4 427 aa17.75■□□□□ 0.43
HDAC7-220ENST00000471235 OR10D3Q8NH80 312 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms