RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 PMF1-BGLAPU3KQ54 211 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 A0A087WV48 116 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 B4DXG7 233 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 K7ENP7 123 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ACOX3O15254 700 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 KIAA0513O60268 411 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ICOSLGO75144 302 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 STX11O75558 287 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 REM1O75628 298 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 TIPRLO75663 272 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 OR6B1O95007 311 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 MFN2O95140 757 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 IL33O95760 270 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 F10P00742 488 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 SERPINA1P01009 418 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CELA3BP08861 270 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 RPS4Y1P22090 263 aaKnown RBP4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ITGA3P26006 1051 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 SOX3P41225 446 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CRISP3P54108 245 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 SOX8P57073 446 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 FBXW4P57775 412 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 TXNL4AP83876 142 aaKnown RBP4.32□□□□□ -1.72
SF3B1-208ENST00000470268 PLCXD2Q0VAA5 305 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 BNIP2Q12982 314 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 GPR68Q15743 365 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 DUSP7Q16829 419 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF791Q3KP31 576 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-208ENST00000470268 GRAMD1BQ3KR37 738 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 SPATS1Q496A3 300 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 LRRC23Q53EV4 343 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-208ENST00000470268 MTX3Q5HYI7 312 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CRB2Q5IJ48 1285 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ACER2Q5QJU3 275 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 C1QTNF12Q5T7M4 302 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ATAD3BQ5T9A4 648 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 LCN8Q6JVE9 175 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ERICH5Q6P6B1 374 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 INO80CQ6PI98 192 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CCDC80Q76M96 950 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 VTCN1Q7Z7D3 282 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 DHFR2Q86XF0 187 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 VRK2Q86Y07 508 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 BEST3Q8N1M1 668 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 GALNT4Q8N4A0 578 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 SMYD1Q8NB12 490 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CLEC1AQ8NC01 280 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 FDCSPQ8NFU4 85 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 GPR32P1Q8NGA4 272 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 OR5L2Q8NGL0 311 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 OR5M3Q8NGP4 307 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CANT1Q8WVQ1 401 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ARSGQ96EG1 525 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 COL21A1Q96P44 957 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 NODALQ96S42 347 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 KLHDC3Q9BQ90 382 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 LHPPQ9H008 270 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 GORASP2Q9H8Y8 452 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 EXD2Q9NVH0 621 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 RLIMQ9NVW2 624 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 THUMPD1Q9NXG2 353 aaKnown RBP4.32□□□□□ -1.72
SF3B1-208ENST00000470268 ACTR3BQ9P1U1 418 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 RIMS3Q9UJD0 308 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 LIPT1Q9Y234 373 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 POLHQ9Y253 713 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 WDR45Q9Y484 360 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 PCDHGB3Q9Y5G1 929 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 SNX13Q9Y5W8 968 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 CEP295Q9C0D2 2601 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 MGAQ8IWI9 3026 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 BSNQ9UPA5 3926 aa4.32□□□□□ -1.72
SF3B1-208ENST00000470268 A0A0G2JNJ9 132 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 A0A0G2JPF8 293 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 AGAP5A6NIR3 686 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 HNRNPCL2B2RXH8 293 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 HNRNPCL3B7ZW38 293 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 C5orf58C9J3I9 102 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 K7EM74 188 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 RRP8O43159 456 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 FKBP6O75344 327 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SOX30O94993 753 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OXSR1O95747 527 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 AGR2O95994 175 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 AK1P00568 194 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PLA2G1BP04054 148 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 UBTFL6P0CB48 400 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 HNRNPCL4P0DMR1 293 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CYP4B1P13584 511 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ETS2P15036 469 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TNFRSF1BP20333 461 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GCKP35557 465 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 DCTP40126 519 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PTGDSP41222 190 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ANXA11P50995 505 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CCL11P51671 97 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PNLIPRP2P54317 469 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TRAP1Q12931 704 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 MALLQ13021 153 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CD226Q15762 336 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms