RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CTBP2P56545 445 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 CRYZQ08257 329 aaKnown RBP16.59■□□□□ 0.25
SMC4-211ENST00000469858 TRIP6Q15654 476 aaKnown RBP16.59■□□□□ 0.25
SMC4-211ENST00000469858 SNAPC1Q16533 368 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 ZBED5Q49AG3 693 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 BORAQ6PGQ7 559 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 TMPRSS11FQ6ZWK6 438 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 TIPARPQ7Z3E1 657 aaKnown RBP16.59■□□□□ 0.25
SMC4-211ENST00000469858 OR13C2Q8NGS9 318 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 ZNF563Q8TA94 476 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 DGCR14Q96DF8 476 aaKnown RBP16.59■□□□□ 0.25
SMC4-211ENST00000469858 SAMD8Q96LT4 415 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 POLDIP3Q9BY77 421 aaKnown RBP16.59■□□□□ 0.25
SMC4-211ENST00000469858 CEPT1Q9Y6K0 416 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 SDK2Q58EX2 2172 aa16.59■□□□□ 0.25
SMC4-211ENST00000469858 A0A087WUJ7 227 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 SH3D21A4FU49 640 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 ENO4A6NNW6 628 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 C9orf172C9J069 976 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 TLX2O43763 284 aaPredicted RBP16.58■□□□□ 0.25
SMC4-211ENST00000469858 FADS1O60427 444 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 ENTPD6O75354 484 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 NADKO95544 446 aaPredicted RBP16.58■□□□□ 0.25
SMC4-211ENST00000469858 JUNBP17275 347 aaPredicted RBP16.58■□□□□ 0.25
SMC4-211ENST00000469858 PCMT1P22061 227 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 EMX1Q04741 257 aaPredicted RBP16.58■□□□□ 0.25
SMC4-211ENST00000469858 EFR3AQ14156 821 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 CNPY1Q3B7I2 92 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 C3orf38Q5JPI3 329 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 CCDC81Q6ZN84 652 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 BCDIN3DQ7Z5W3 292 aaKnown RBP16.58■□□□□ 0.25
SMC4-211ENST00000469858 CLDN22Q8N7P3 220 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 OR4Q3Q8NH05 313 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 GGHQ92820 318 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 DEFB126Q9BYW3 111 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 OR52D1Q9H346 318 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 MYOTQ9UBF9 498 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 PCNX3Q9H6A9 2034 aa16.58■□□□□ 0.25
SMC4-211ENST00000469858 EFCAB9A8MZ26 197 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 FADS2O95864 444 aaKnown RBP16.58■□□□□ 0.24
SMC4-211ENST00000469858 DLGAP3O95886 979 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 CH25HO95992 272 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 COX6A1P12074 109 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 TCN2P20062 427 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 ITPKBP27987 946 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 MAP2K4P45985 399 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 MLLT10P55197 1068 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 RPS18P62269 152 aaKnown RBP16.58■□□□□ 0.24
SMC4-211ENST00000469858 PRSS48Q7RTY5 328 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 CT55Q8WUE5 264 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 SLC38A2Q96QD8 506 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 ZNF700Q9H0M5 742 aa16.58■□□□□ 0.24
SMC4-211ENST00000469858 ELOA3DA6NLF2 546 aaPredicted RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 LRP3O75074 770 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 OR2J2O76002 312 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 NUDT14O95848 222 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 CELA2AP08217 269 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 TGM1P22735 817 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 MST1P26927 711 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 SLC6A8P48029 635 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 FXYD6P3P58550 94 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 ELOA3BQ3SY89 546 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 TMEM201Q5SNT2 666 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 PIP4P1Q86T03 277 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 ELOA3Q8NG57 546 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 BRIX1Q8TDN6 353 aaKnown RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 ELP5Q8TE02 316 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 MYDGFQ969H8 173 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 ZNF524Q96C55 264 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 Q96MT0 163 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 SIGLEC11Q96RL6 698 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 PRRG3Q9BZD7 231 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 YIPF3Q9GZM5 350 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 LHPPQ9H008 270 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 FKBP14Q9NWM8 211 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 FOXJ2Q9P0K8 574 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 TRAV27A0A087WT01 109 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 EIF4E2O60573 245 aaKnown RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 MRPS14O60783 128 aaKnown RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 C21orf33P30042 268 aaPredicted RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 MASP1P48740 699 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 MVKQ03426 396 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 EIF3IQ13347 325 aaKnown RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 PGGHGQ32M88 737 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 STPG1Q5TH74 334 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 TMEM164Q5U3C3 297 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 MRGPREQ86SM8 312 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 CLVS1Q8IUQ0 354 aaPredicted RBP16.57■□□□□ 0.24
SMC4-211ENST00000469858 SVOPQ8N4V2 548 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 OR2T33Q8NG76 320 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 OR52L1Q8NGH7 329 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 IMMP1LQ96LU5 166 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 TUBA1CQ9BQE3 449 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 TEX12Q9BXU0 123 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 ICAM5Q9UMF0 924 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 SIGLEC7Q9Y286 467 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 GPR52Q9Y2T5 361 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 PCDHGB1Q9Y5G3 927 aa16.57■□□□□ 0.24
SMC4-211ENST00000469858 CDK1P06493 297 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 CD63P08962 238 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms