RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 FIG4Q92562 907 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 CNOT9Q92600 299 aaKnown RBP8.74□□□□□ -1.01
SRRT-208ENST00000469602 MAL2Q969L2 176 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 LRRC46Q96FV0 321 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 KLHL15Q96M94 604 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 ZNF317Q96PQ6 595 aaPredicted RBP8.74□□□□□ -1.01
SRRT-208ENST00000469602 TRIM8Q9BZR9 551 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 RNF122Q9H9V4 155 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 ACER3Q9NUN7 267 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 DNAJB12Q9NXW2 375 aaKnown RBP8.74□□□□□ -1.01
SRRT-208ENST00000469602 JKAMPQ9P055 326 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 KLHL14Q9P2G3 628 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.74□□□□□ -1.01
SRRT-208ENST00000469602 CORO2BQ9UQ03 480 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 NDUFAF1Q9Y375 327 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 CREBBPQ92793 2442 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 SPG11Q96JI7 2443 aa8.74□□□□□ -1.01
SRRT-208ENST00000469602 A0A0G2JPF8 293 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 A0A0J9YW62 118 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 A0A1W2PNV4 684 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 CDHR4A6H8M9 788 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 EVPLLA8MZ36 301 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 HNRNPCL2B2RXH8 293 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 HNRNPCL3B7ZW38 293 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 EEF1E1-BLOC1S5C9J1V9 151 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 EEF1E1O43324 174 aaKnown RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 CXCL13O43927 109 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 HNRNPCL1O60812 293 aaKnown RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 ADAM11O75078 769 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 TNFSF13O75888 250 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 AQP8O94778 261 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 THBS1P07996 1170 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 HNRNPCL4P0DMR1 293 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 PRF1P14222 555 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 GPX2P18283 190 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 SHC1P29353 583 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 RYKP34925 604 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 SFTPDP35247 375 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 DLX5P56178 289 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 CARD18P57730 90 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 SESN3P58005 492 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 MERTKQ12866 999 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 SF3A3Q12874 501 aaKnown RBP eCLIP8.73□□□□□ -1.015e-6■■■■■ 39.5
SRRT-208ENST00000469602 TMEM176BQ3YBM2 270 aaPredicted RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 RPS26P11Q5JNZ5 115 aaPredicted RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 PDSS1Q5T2R2 415 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 GCNT6Q5T4J0 391 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 MRPL2Q5T653 305 aaKnown RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 C3orf33Q6P1S2 294 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 DHDDSQ86SQ9 333 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 RETREG3Q86VR2 466 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 MCEMP1Q8IX19 187 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 C10orf111Q8N326 155 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 ATP6V1C2Q8NEY4 427 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 OR52P1PQ8NH57 321 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 ZNF563Q8TA94 476 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 BBS10Q8TAM1 723 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 OSTF1Q92882 214 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 RNASE6Q93091 150 aaKnown RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 CPPED1Q9BRF8 314 aaPredicted RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 PIGMQ9H3S5 423 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 IKZF5Q9H5V7 419 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 BCL2L10Q9HD36 194 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 SAR1AQ9NR31 198 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 RLIMQ9NVW2 624 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 FOXD3Q9UJU5 478 aaPredicted RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 MCTS1Q9ULC4 181 aaKnown RBP8.73□□□□□ -1.01
SRRT-208ENST00000469602 CCDC168Q8NDH2 2452 aa8.73□□□□□ -1.01
SRRT-208ENST00000469602 ABCA4P78363 2273 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 CFAP73A6NFT4 308 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 C5orf58C9J3I9 102 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 FAAHO00519 579 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 AP3D1O14617 1153 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 PGM3O95394 542 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 SYNGR4O95473 234 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 SLC7A1P30825 629 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 UQCRC1P31930 480 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 APOBEC1P41238 236 aaKnown RBP8.72□□□□□ -1.01
SRRT-208ENST00000469602 IDH2P48735 452 aaKnown RBP8.72□□□□□ -1.01
SRRT-208ENST00000469602 CDK6Q00534 326 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 NFYCQ13952 458 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 LARS2Q15031 903 aaKnown RBP8.72□□□□□ -1.01
SRRT-208ENST00000469602 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 RUNDC3AQ59EK9 446 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 RNF220Q5VTB9 566 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 REEP3Q6NUK4 255 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 PPP4R4Q6NUP7 873 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 ZNF836Q6ZNA1 936 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 PLEKHM3Q6ZWE6 761 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 GRINAQ7Z429 371 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 GDF7Q7Z4P5 450 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 VRK2Q86Y07 508 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 ZNF440Q8IYI8 595 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 CNEP1R1Q8N9A8 125 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 NFKBIDQ8NI38 313 aa8.72□□□□□ -1.01
SRRT-208ENST00000469602 CPNE4Q96A23 557 aaPredicted RBP8.72□□□□□ -1.01
SRRT-208ENST00000469602 STARD4Q96DR4 205 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms