RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR4K2Q8NGD2 314 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 OR5B17Q8NGF7 314 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 OR4C15Q8NGM1 316 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 NEIL3Q8TAT5 605 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CSGALNACT1Q8TDX6 532 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SLC35F5Q8WV83 523 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 MAFIPQ8WZ33 124 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RSC1A1Q92681 617 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM143Q96AN5 459 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LRR1Q96L50 414 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 TEX37Q96LM6 180 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 KCNC2Q96PR1 638 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 DDOQ99489 341 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ADAM2Q99965 735 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 WDR77Q9BQA1 342 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 MGME1Q9BQP7 344 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RHNO1Q9BSD3 238 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 COLEC11Q9BWP8 271 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 POLR3FQ9H1D9 316 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GAL3ST2Q9H3Q3 398 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 WDCPQ9H6R7 721 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 EXO5Q9H790 373 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 BARX1Q9HBU1 254 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 NOX3Q9HBY0 568 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CRLF2Q9HC73 371 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LTB4R2Q9NPC1 389 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 B3GAT2Q9NPZ5 323 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 INPP5EQ9NRR6 644 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RBM22Q9NW64 420 aaKnown RBP eCLIP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ZSCAN32Q9NX65 697 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 FTSJ1Q9UET6 329 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 PCTPQ9UKL6 214 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GAB2Q9UQC2 676 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 TNFSF13BQ9Y275 285 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SF3B6Q9Y3B4 125 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 PLEKHM1Q9Y4G2 1056 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SPIN1Q9Y657 262 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 PCNTO95613 3336 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 A0A0G2JMZ2 1700 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LRRC37A2A6NM11 1700 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LRRC37AA6NMS7 1700 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LY75O60449 1722 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 DSPPQ9NZW4 1301 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3DA0A087WVF3 549 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3IA0A087WXS9 549 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3EA0A087X179 549 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3KA0A087X1G2 549 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 LOC105369274A0A096LPK9 316 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 A0A1B0GV90 55 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 A0A1W2PN81 502 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GNG14A0A1W2PPG7 69 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 A0A1W2PPQ1 181 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3FA6NER0 549 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GGT3PA6NGU5 568 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D3LB9A6J9 549 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 G3V3Q6 166 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GABARAPH6UMI1 98 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 HAS3O00219 553 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 FAAHO00519 579 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MFNGO00587 321 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 AQP7O14520 342 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MATN3O15232 486 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 FGF10O15520 208 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 TXNL1O43396 289 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 BCL2L11O43521 198 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GRAP2O75791 330 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CRHP06850 196 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MELTFP08582 738 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 HCKP08631 526 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ANXA5P08758 320 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 EBLN1P0CF75 366 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RNF224P0DH78 156 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ACP2P11117 423 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF44P15621 663 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MUC1P15941 1255 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 EPCAMP16422 314 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 HOXB9P17482 250 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PI3P19957 117 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PRPS1L1P21108 318 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 GABRR1P24046 479 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PPP2R1BP30154 601 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CCND3P30281 292 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 HOXA13P31271 388 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ADRA1AP35348 466 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ARL2P36404 184 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ATP6V1E1P36543 226 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CHRNA7P36544 502 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 IFNGR2P38484 337 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RPL3P39023 403 aaKnown RBP4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SOX3P41225 446 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 RABIFP47224 123 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 PRKXP51817 358 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ART1P52961 327 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 CTSCP53634 463 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 VLDLRP98155 873 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 SPIBQ01892 262 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 ACVR1Q04771 509 aa4.51□□□□□ -1.69
SF3B1-207ENST00000468925 MXD1Q05195 221 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms