RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MMP25Q9NPA2 562 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 MEPEQ9NQ76 525 aaPredicted RBP17.35■□□□□ 0.37
SMC4-209ENST00000468653 TBC1D23Q9NUY8 699 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 CLN6Q9NWW5 311 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 TVP23BQ9NYZ1 205 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 A0A087WUJ7 227 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 DKK1O94907 266 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 NUDT14O95848 222 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 SAGP10523 405 aaPredicted RBP17.34■□□□□ 0.37
SMC4-209ENST00000468653 TEKQ02763 1124 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 DNASE1L3Q13609 305 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 NADK2Q4G0N4 442 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 ZNF620Q6ZNG0 422 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 TMPRSS11FQ6ZWK6 438 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 PPP1R32Q7Z5V6 425 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 HEATR5AQ86XA9 2040 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 MISPQ8IVT2 679 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 TRUB1Q8WWH5 349 aaKnown RBP17.34■□□□□ 0.37
SMC4-209ENST00000468653 TTC9Q92623 222 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 HGDQ93099 445 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 IL4I1Q96RQ9 567 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 TSSK6Q9BXA6 273 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 IL20Q9NYY1 176 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 CDH10Q9Y6N8 788 aa17.34■□□□□ 0.37
SMC4-209ENST00000468653 A0A1W2PQ72 361 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 ELOA3DA6NLF2 546 aaPredicted RBP17.33■□□□□ 0.37
SMC4-209ENST00000468653 EFCAB9A8MZ26 197 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 PNMTP11086 282 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 PIGFQ07326 219 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 CRYZQ08257 329 aaKnown RBP17.33■□□□□ 0.37
SMC4-209ENST00000468653 ELOA3BQ3SY89 546 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 CLEC12AQ5QGZ9 265 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 ACSM5Q6NUN0 579 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 KCTD8Q6ZWB6 473 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 SLC15A4Q8N697 577 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 CLDN22Q8N7P3 220 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 ELOA3Q8NG57 546 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 OR8D4Q8NGM9 314 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 OR5W2Q8NH69 310 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 DUSP19Q8WTR2 217 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 RASL10BQ96S79 203 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 CCNL2Q96S94 520 aaPredicted RBP17.33■□□□□ 0.37
SMC4-209ENST00000468653 TEX12Q9BXU0 123 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 CCDC90BQ9GZT6 254 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 FAM192AQ9GZU8 254 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 VCX3AQ9NNX9 186 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 PAK1IP1Q9NWT1 392 aaPredicted RBP17.33■□□□□ 0.37
SMC4-209ENST00000468653 ICAM5Q9UMF0 924 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 SNX5Q9Y5X3 404 aa17.33■□□□□ 0.37
SMC4-209ENST00000468653 C21orf140B9A014 251 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 PGCP20142 388 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 DLSTP36957 453 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 P2RX1P51575 399 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 SNRPGP62308 76 aaKnown RBP17.33■□□□□ 0.36
SMC4-209ENST00000468653 CBFBQ13951 182 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 TCEANCQ8N8B7 351 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 OR8J1Q8NGP2 316 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 B4GALNT2Q8NHY0 566 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 FANK1Q8TC84 345 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 GPR87Q9BY21 358 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 PRRG3Q9BZD7 231 aa17.33■□□□□ 0.36
SMC4-209ENST00000468653 SDK2Q58EX2 2172 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 ENO4A6NNW6 628 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 C17orf51A8MQB3 221 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 RAD1O60671 282 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 ITGA10O75578 1167 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 FBXO45P0C2W1 286 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 FUT1P19526 365 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 SLC1A3P43003 542 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 ALDH3B2P48448 385 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 PCYT1AP49585 367 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 SNAPC1Q16533 368 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 LYPD8Q6UX82 237 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 ATG4DQ86TL0 474 aaPredicted RBP17.32■□□□□ 0.36
SMC4-209ENST00000468653 IPCEF1Q8WWN9 437 aaPredicted RBP17.32■□□□□ 0.36
SMC4-209ENST00000468653 SAMD8Q96LT4 415 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 SLC38A2Q96QD8 506 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 KLHDC3Q9BQ90 382 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 DUSP21Q9H596 190 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 CCNB1IP1Q9NPC3 277 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 PLCXD1Q9NUJ7 323 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 ERVK-18Q9QC07 812 aa17.32■□□□□ 0.36
SMC4-209ENST00000468653 RCBTB2O95199 551 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 ICAM2P13598 275 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 NUDT6P53370 316 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 LIMK1P53667 647 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 SLC35A2P78381 396 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 C17orf67Q0P5P2 114 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 RPL13AP3Q6NVV1 102 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 TMPRSS12Q86WS5 348 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 SPARTQ8N0X7 666 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 OR52L1Q8NGH7 329 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 OR13C2Q8NGS9 318 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 BRIX1Q8TDN6 353 aaKnown RBP17.31■□□□□ 0.36
SMC4-209ENST00000468653 SPACA9Q96E40 222 aaPredicted RBP17.31■□□□□ 0.36
SMC4-209ENST00000468653 Q96MT0 163 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 POLDIP3Q9BY77 421 aaKnown RBP17.31■□□□□ 0.36
SMC4-209ENST00000468653 B3GNT4Q9C0J1 378 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 OR52D1Q9H346 318 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 AMBNQ9NP70 447 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms