RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CASP9P55211 416 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 NME5P56597 212 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 UFM1P61960 85 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 DEFB113Q30KQ7 82 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 TMEM201Q5SNT2 666 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 TYW3Q6IPR3 259 aaKnown RBP17.04■□□□□ 0.32
COL7A1-207ENST00000467985 C3orf33Q6P1S2 294 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 SLC43A2Q8N370 569 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 RAB8BQ92930 207 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 TEX37Q96LM6 180 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 OR52E6Q96RD3 313 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 PANX1Q96RD7 426 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 THUMPD3Q9BV44 507 aaKnown RBP17.04■□□□□ 0.32
COL7A1-207ENST00000467985 WDR55Q9H6Y2 383 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-207ENST00000467985 SERINC1Q9NRX5 453 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 LIPT1Q9Y234 373 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 GPR45Q9Y5Y3 372 aa17.04■□□□□ 0.32
COL7A1-207ENST00000467985 GOLGA8QA0A0J9YX86 632 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 GOLGA8OA6NCC3 632 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 CCDC154A6NI56 674 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 DEFB108AA8MXU0 73 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 GOLGA8NF8WBI6 632 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 CYP7B1O75881 506 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 UBTFL6P0CB48 400 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-207ENST00000467985 KITP10721 976 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 CD99P14209 185 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 RAC3P60763 192 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 TIGD2Q4W5G0 525 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 FCRLAQ7L513 359 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 ZNF550Q7Z398 422 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 ZNF619Q8N2I2 560 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 ATP6V1C2Q8NEY4 427 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 ROBO4Q8WZ75 1007 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 PIK3IP1Q96FE7 263 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 TMUB1Q9BVT8 246 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 SRXN1Q9BYN0 137 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 OR10A4Q9H209 315 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 BEX4Q9NWD9 120 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-207ENST00000467985 C6orf203Q9P0P8 240 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-207ENST00000467985 KLHL13Q9P2N7 655 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 ACANP16112 2415 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 HEATR5AQ86XA9 2040 aa17.03■□□□□ 0.32
COL7A1-207ENST00000467985 IL6P05231 212 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 VIMP08670 466 aaKnown RBP17.02■□□□□ 0.32
COL7A1-207ENST00000467985 MAGEA8P43361 318 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 GYS2P54840 703 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 MAPK14Q16539 360 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 GPAT3Q53EU6 434 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 NXNQ6DKJ4 435 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 STAC2Q6ZMT1 411 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 FRRS1Q6ZNA5 592 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 FAM71CQ8NEG0 241 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 ABHD3Q8WU67 409 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 SLC25A43Q8WUT9 341 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-207ENST00000467985 PMM1Q92871 262 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 MAELQ96JY0 434 aaKnown RBP17.02■□□□□ 0.32
COL7A1-207ENST00000467985 TRNT1Q96Q11 434 aaKnown RBP17.02■□□□□ 0.32
COL7A1-207ENST00000467985 HDHD5Q9BXW7 423 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 COQ10BQ9H8M1 238 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-207ENST00000467985 ACER3Q9NUN7 267 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 GPR52Q9Y2T5 361 aa17.02■□□□□ 0.32
COL7A1-207ENST00000467985 SPIN1Q9Y657 262 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-207ENST00000467985 CENPVL1A0A0U1RR11 272 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 A0A1W2PPR1 153 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 HMGN4O00479 90 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 SLC22A3O75751 556 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 H6PDO95479 791 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 YES1P07947 543 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 CD53P19397 219 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 KLK2P20151 261 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 FKBP2P26885 142 aaKnown RBP17.01■□□□□ 0.31
COL7A1-207ENST00000467985 IL12AP29459 219 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 PGM1P36871 562 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 SESN3P58005 492 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 FUT5Q11128 374 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 MERTKQ12866 999 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 GSTA3Q16772 222 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 PDCD4Q53EL6 469 aaKnown RBP17.01■□□□□ 0.31
COL7A1-207ENST00000467985 ZNF621Q6ZSS3 439 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 OLIG3Q7RTU3 272 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 RNF130Q86XS8 419 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 CMIPQ8IY22 773 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 PIWIL2Q8TC59 973 aaKnown RBP17.01■□□□□ 0.31
COL7A1-207ENST00000467985 ZNF524Q96C55 264 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 ZC3HAV1LQ96H79 300 aaKnown RBP17.01■□□□□ 0.31
COL7A1-207ENST00000467985 C7orf26Q96N11 449 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 C12orf49Q9H741 205 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 SLCO1B3Q9NPD5 702 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 EXOSC3Q9NQT5 275 aaKnown RBP17.01■□□□□ 0.31
COL7A1-207ENST00000467985 FAM53CQ9NYF3 392 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 KLHL9Q9P2J3 617 aa17.01■□□□□ 0.31
COL7A1-207ENST00000467985 SIAH2O43255 324 aa17■□□□□ 0.31
COL7A1-207ENST00000467985 KRT75O95678 551 aa17■□□□□ 0.31
COL7A1-207ENST00000467985 PSMB1P20618 241 aaKnown RBP17■□□□□ 0.31
COL7A1-207ENST00000467985 FPR1P21462 350 aa17■□□□□ 0.31
COL7A1-207ENST00000467985 APOBEC1P41238 236 aaKnown RBP17■□□□□ 0.31
COL7A1-207ENST00000467985 KCNJ10P78508 379 aa17■□□□□ 0.31
COL7A1-207ENST00000467985 GNA13Q14344 377 aa17■□□□□ 0.31
COL7A1-207ENST00000467985 ANKRD34AQ69YU3 496 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms