RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 BCO1Q9HAY6 547 aa18.68■□□□□ 0.58
COL9A3-207ENST00000467819 ING1Q9UK53 422 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-207ENST00000467819 ANK3Q12955 4377 aaKnown RBP18.67■□□□□ 0.58
COL9A3-207ENST00000467819 ABCA1O95477 2261 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 PLCE1Q9P212 2302 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 CENPVL1A0A0U1RR11 272 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 RNF103-CHMP3A0A140T963 221 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 SMAD9O15198 467 aaKnown RBP18.67■□□□□ 0.58
COL9A3-207ENST00000467819 BPGMP07738 259 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 NUDT17P0C025 328 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 CREB1P16220 341 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 CDKN1AP38936 164 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 OR3A2P47893 321 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 SKP2Q13309 424 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 ZNF672Q499Z4 452 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-207ENST00000467819 OR4F3Q6IEY1 312 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 Q6ZT83 130 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 C6orf120Q7Z4R8 191 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 SMAP2Q8WU79 429 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-207ENST00000467819 ARL8AQ96BM9 186 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 TRMT61AQ96FX7 289 aaKnown RBP18.67■□□□□ 0.58
COL9A3-207ENST00000467819 PPP1R36Q96LQ0 422 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 LAT2Q9GZY6 243 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 KCNE5Q9UJ90 142 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 MKLN1Q9UL63 735 aa18.67■□□□□ 0.58
COL9A3-207ENST00000467819 MAGED1Q9Y5V3 778 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-207ENST00000467819 A0A1W2PP18 115 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 DUXAA6NLW8 204 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 RNF223E7ERA6 249 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 OVOL3O00110 214 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 ETV2O00321 342 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-207ENST00000467819 FCMRO60667 390 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 CSTAP01040 98 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 DANCRP0C864 163 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 UBTFL6P0CB48 400 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-207ENST00000467819 EDNRAP25101 427 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 CASP9P55211 416 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 CLDN8P56748 225 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 MERTKQ12866 999 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 FAPQ12884 760 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 MAD2L1Q13257 205 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-207ENST00000467819 ZNF141Q15928 474 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 PDCD2Q16342 344 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-207ENST00000467819 SEZ6L2Q6UXD5 910 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 C16orf62Q7Z3J2 963 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 PIWIL2Q8TC59 973 aaKnown RBP18.66■□□□□ 0.58
COL9A3-207ENST00000467819 MDFIQ99750 246 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 L2HGDHQ9H9P8 463 aa18.66■□□□□ 0.58
COL9A3-207ENST00000467819 NOP53Q9NZM5 478 aaKnown RBP18.66■□□□□ 0.58
COL9A3-207ENST00000467819 DPRXA6NFQ7 191 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 CYTIPO60759 359 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 STX11O75558 287 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 UGT2B17O75795 530 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 AK1P00568 194 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 SESN3P58005 492 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 C21orf58P58505 322 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 EMX2Q04743 252 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 ARHGAP11BQ3KRB8 267 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 OR4A15Q8NGL6 344 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 ST8SIA1Q92185 356 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 PKNOX2Q96KN3 472 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 USB1Q9BQ65 265 aaKnown RBP18.65■□□□□ 0.58
COL9A3-207ENST00000467819 OR51I1Q9H343 314 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 SERINC1Q9NRX5 453 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 LIPT1Q9Y234 373 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 ATRQ13535 2644 aa18.65■□□□□ 0.58
COL9A3-207ENST00000467819 FESP07332 822 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 PGCP20142 388 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 IDUAP35475 653 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 DIO1P49895 249 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 VSNL1P62760 191 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 KRTAP1-1Q07627 177 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 PPA1Q15181 289 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF100Q8IYN0 542 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF75CPQ92670 426 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-207ENST00000467819 TRIM44Q96DX7 344 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-207ENST00000467819 DNAJA3Q96EY1 480 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 TRIM2Q9C040 744 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 ZNF350Q9GZX5 532 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 EXD2Q9NVH0 621 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 ADAM21Q9UKJ8 722 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 COL6A5A8TX70 2615 aa18.64■□□□□ 0.57
COL9A3-207ENST00000467819 SULT2B1O00204 365 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ITM2AO43736 263 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 DNAJA2O60884 412 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 RAMP1O60894 148 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 TFPIP10646 304 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 IGHV1-2P23083 117 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ACVR1BP36896 505 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ETFDHQ16134 617 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 MAPK14Q16539 360 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 PGGHGQ32M88 737 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 SYT14P1Q58G82 188 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 EIF3MQ7L2H7 374 aaKnown RBP18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ANKRD46Q86W74 232 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 NUDCD3Q8IVD9 361 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 TMEM234Q8WY98 164 aa18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ROPN1BQ9BZX4 212 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-207ENST00000467819 HEATR1Q9H583 2144 aaKnown RBP18.63■□□□□ 0.57
COL9A3-207ENST00000467819 ROPN1Q9HAT0 212 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms