RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CHMP24386 653 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 TGFBR1P36897 503 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 ETV6P41212 452 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 SLC15A1P46059 708 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 UGT2B15P54855 530 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 PCOLCEQ15113 449 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 PLAG1Q6DJT9 500 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 PTCHD4Q6ZW05 846 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 BCORP1Q8N888 145 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 GTPBP3Q969Y2 492 aaKnown RBP17.12■□□□□ 0.33
CAPN3-209ENST00000466222 EFHD2Q96C19 240 aaPredicted RBP17.12■□□□□ 0.33
CAPN3-209ENST00000466222 WWTR1Q9GZV5 400 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 WDR70Q9NW82 654 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 CFL2Q9Y281 166 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 AKAP13Q12802 2813 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 SNX4O95219 450 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 OTX2P32243 289 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 DLSTP36957 453 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 STAT5AP42229 794 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 KCNJ5P48544 419 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 NR0B1P51843 470 aaKnown RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 FOXD4Q12950 439 aaPredicted RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 GNA13Q14344 377 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 TMEM201Q5SNT2 666 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 ESX1Q8N693 406 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 ARSGQ96EG1 525 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 CDADC1Q9BWV3 514 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 UCK2Q9BZX2 261 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 C6orf62Q9GZU0 229 aaPredicted RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 Q9N2J8 555 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 CBLCQ9ULV8 474 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 IGHV1-45A0A0A0MS14 117 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 STMND1H3BQB6 276 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 CCRL2O00421 344 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 SOCS6O14544 535 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 FRS3O43559 492 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF354AO60765 605 aaPredicted RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 STX11O75558 287 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 PTTG1O95997 202 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 GASTP01350 101 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 TRHRP34981 398 aaPredicted RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 PPICP45877 212 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 SLC26A5P58743 744 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 RNF4P78317 190 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 GANABQ14697 944 aaKnown RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF311Q5JNZ3 666 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 SLX4IPQ5VYV7 408 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 KRT73Q86Y46 540 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 CACTIN-AS1Q8N1I8 211 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 CLIP4Q8N3C7 705 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 OR11G2Q8NGC1 345 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 OR52P1PQ8NH57 321 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 VANGL1Q8TAA9 524 aaPredicted RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 SEMA4CQ9C0C4 833 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 MTHFD2LQ9H903 347 aaPredicted RBP17.11■□□□□ 0.33
CAPN3-209ENST00000466222 ASCL3Q9NQ33 180 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 FLRT3Q9NZU0 649 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 IL17BQ9UHF5 180 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF229Q9UJW7 825 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 LOC400499M0QZD8 3231 aa17.11■□□□□ 0.33
CAPN3-209ENST00000466222 LOC102723996A0A087X1L8 192 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 TRBV11-1A0A0K0K1C0 115 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 TMEM200CA6NKL6 621 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 M0R3H8 397 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 TERTO14746 1132 aaKnown RBP17.1■□□□□ 0.33
CAPN3-209ENST00000466222 SEMA7AO75326 666 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 UGT2B17O75795 530 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 COX6A1P12074 109 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 MMP11P24347 488 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 EIF2B2P49770 351 aaKnown RBP17.1■□□□□ 0.33
CAPN3-209ENST00000466222 DNASE1L3Q13609 305 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 RNLSQ5VYX0 342 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 GDPGP1Q6ZNW5 385 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 SNX29P2Q8IUI4 249 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 OR4C3Q8NH37 302 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 LCORQ96JN0 433 aaPredicted RBP17.1■□□□□ 0.33
CAPN3-209ENST00000466222 ART5Q96L15 291 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 MGLLQ99685 303 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 PRR14Q9BWN1 585 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 OR51E2Q9H255 320 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 SIAEQ9HAT2 523 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 SLC25A19Q9HC21 320 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 C19orf25Q9UFG5 118 aaPredicted RBP17.1■□□□□ 0.33
CAPN3-209ENST00000466222 FRYQ5TBA9 3013 aa17.1■□□□□ 0.33
CAPN3-209ENST00000466222 LOC100506127A0A0U1RQW1 187 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 CDRT15L2A8MXV6 281 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 LOC110117498-PIK3R3F6TDL0 507 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ALPPP05187 535 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
CAPN3-209ENST00000466222 GRK5P34947 590 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 HOXC5Q00444 222 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 IL10RAQ13651 578 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 BTBD16Q32M84 506 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 FLYWCH1Q4VC44 716 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 DCST1Q5T197 706 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 HSDL2Q6YN16 418 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 PPP1R32Q7Z5V6 425 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 LINC00471Q8N535 108 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 NKD1Q969G9 470 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF354BQ96LW1 612 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms