RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	RNPEPL1	Q9HAU8	725 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	NTN4	Q9HB63	628 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	PPP4R1L	Q9P1A2	415 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	ICAM5	Q9UMF0	924 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	A4GNT	Q9UNA3	340 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	WIF1	Q9Y5W5	379 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	CPAMD8	Q8IZJ3	1885 aa		11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	GCN1	Q92616	2671 aa	Known RBP	11.2	□□□□□ -0.62
PTPN7-205	ENST00000464870	ANKRD33B	A6NCL7	494 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	NPIPA5	E9PKD4	350 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	ACOT7	O00154	380 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	GNGT2	O14610	69 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	TFEC	O14948	347 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	PRSS23	O95084	383 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	THY1	P04216	161 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	LINGO3	P0C6S8	592 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	ITGA2	P17301	1181 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	ENDOU	P21128	410 aa	Known RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	MST1	P26927	711 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	RRM2	P31350	389 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	UQCRFS1	P47985	274 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	IDH2	P48735	452 aa	Known RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	P2RX1	P51575	399 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	TDGF1P3	P51864	188 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	SESN3	P58005	492 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	TAS2R41	P59536	307 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	SPIB	Q01892	262 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	SNTA1	Q13424	505 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR2T5	Q6IEZ7	315 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	GFRAL	Q6UXV0	394 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	PLEKHM3	Q6ZWE6	761 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	TMEM179B	Q7Z7N9	219 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC22A16	Q86VW1	577 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	MISP	Q8IVT2	679 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF440	Q8IYI8	595 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	CADM2	Q8N3J6	435 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	WDSUB1	Q8N9V3	476 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR2M3	Q8NG83	312 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR2T29	Q8NH02	315 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR52J3	Q8NH60	311 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR5W2	Q8NH69	310 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	GPR119	Q8TDV5	335 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	EXOSC3	Q9NQT5	275 aa	Known RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	SDHAF3	Q9NRP4	125 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	TUBA8	Q9NY65	449 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	STX18	Q9P2W9	335 aa	Known RBP	11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	DNAJB9	Q9UBS3	223 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	RIMS3	Q9UJD0	308 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	FBXL2	Q9UKC9	423 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	NPIPA1	Q9UND3	350 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870		U3KQV3	271 aa		11.19	□□□□□ -0.62
PTPN7-205	ENST00000464870	MYO18B	Q8IUG5	2567 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	IGLV3-32	A0A0A0MS00	114 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870		A0A1B0GWA3	101 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	SAC3D1	A6NKF1	404 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	SNPH	O15079	494 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	TRIM3	O75382	744 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	DEAF1	O75398	565 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	LYPD3	O95274	346 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	NUDT14	O95848	222 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	FCGR1A	P12314	374 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	HOXB6	P17509	224 aa	Known RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	TCEA1	P23193	301 aa	Known RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	RFC3	P40938	356 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	MASP1	P48740	699 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	CDH12	P55289	794 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	PPIA	P62937	165 aa	Known RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	RBPJ	Q06330	500 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	LAPTM4A	Q15012	233 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ARSK	Q6UWY0	536 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	GDF7	Q7Z4P5	450 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	CYP4Z1	Q86W10	505 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	PLCZ1	Q86YW0	608 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	FADS6	Q8N9I5	356 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ICA1L	Q8NDH6	482 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	PIK3C3	Q8NEB9	887 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	TOR1AIP2	Q8NFQ8	470 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR4K17	Q8NGC6	315 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF563	Q8TA94	476 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	PRR7	Q8TB68	274 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	RNF217	Q8TC41	542 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ADAMTS16	Q8TE57	1224 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC35B4	Q969S0	331 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC41A3	Q96GZ6	507 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	PRRC1	Q96M27	445 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	GPR137	Q96N19	417 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	GNRHR2	Q96P88	292 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF347	Q96SE7	839 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF559	Q9BR84	538 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	FNDC11	Q9BVV2	318 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	EVA1A	Q9H8M9	152 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	TMEM27	Q9HBJ8	222 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ACER3	Q9NUN7	267 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	TES	Q9UGI8	421 aa	Known RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	ACAD8	Q9UKU7	415 aa		11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	BOK	Q9UMX3	212 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms