RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 KLHL13Q9P2N7 655 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 ACANP16112 2415 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 A0A1W2PNR3 127 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 CCDC154A6NI56 674 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 SLCO1B7G3V0H7 640 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 DNAJA2O60884 412 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 PGRP06401 933 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 KLK2P20151 261 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 GPAT3Q53EU6 434 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 TMEM201Q5SNT2 666 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 BEND6Q5SZJ8 279 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-206ENST00000464750 NXNQ6DKJ4 435 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 RNF130Q86XS8 419 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 TRIML2Q8N7C3 387 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 FAM71CQ8NEG0 241 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 ARL8AQ96BM9 186 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 MARK4Q96L34 752 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 OR52E6Q96RD3 313 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 INPP5KQ9BT40 448 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 SAP130Q9H0E3 1048 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 MANSC1Q9H8J5 431 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 SLC35A3Q9Y2D2 325 aa23.06■■□□□ 1.28
U2AF1-206ENST00000464750 PRAMEF27A3QJZ7 478 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 HMGN4O00479 90 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 BCAS1O75363 584 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-206ENST00000464750 H6PDO95479 791 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 PPP3CBP16298 524 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 PGCP20142 388 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 PGM1P36871 562 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 CDKN2CP42773 168 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 SESN3P58005 492 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 FOXD4Q12950 439 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-206ENST00000464750 HMGN2P46Q86SG4 172 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 TUSC5Q8IXB3 177 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 TMEM234Q8WY98 164 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 HS3ST6Q96QI5 342 aa23.05■■□□□ 1.28
U2AF1-206ENST00000464750 RAI1Q7Z5J4 1906 aaPredicted RBP23.05■■□□□ 1.28
U2AF1-206ENST00000464750 FLNAP21333 2647 aaKnown RBP23.05■■□□□ 1.28
U2AF1-206ENST00000464750 IGHV3-15A0A0B4J1V0 119 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 PRKD3O94806 890 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 THBDP07204 575 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 RAC3P60763 192 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 CHRNEQ04844 493 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 LRRC74AQ0VAA2 488 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 MERTKQ12866 999 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 NUFIP2Q7Z417 695 aaKnown RBP23.04■■□□□ 1.28
U2AF1-206ENST00000464750 GLB1L3Q8NCI6 653 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-206ENST00000464750 MAELQ96JY0 434 aaKnown RBP23.04■■□□□ 1.28
U2AF1-206ENST00000464750 OR5B2Q96R09 309 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 ACTR6Q9GZN1 396 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 UBTD1Q9HAC8 227 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 GP6Q9HCN6 339 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 BEX4Q9NWD9 120 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-206ENST00000464750 SETD2Q9BYW2 2564 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-206ENST00000464750 PRR14LQ5THK1 2151 aa23.04■■□□□ 1.28
U2AF1-206ENST00000464750 GSNP06396 782 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 IDO1P14902 403 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ENPP1P22413 925 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 LOXP28300 417 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ANXA11P50995 505 aaKnown RBP23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ADAM8P78325 824 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 SLC9B1Q4ZJI4 515 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 TFAP2EQ6VUC0 442 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ZNF621Q6ZSS3 439 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 PLEKHM3Q6ZWE6 761 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 SLC43A2Q8N370 569 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ANKFN1Q8N957 763 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ZG16BQ96DA0 208 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 SERINC1Q9NRX5 453 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 ACER3Q9NUN7 267 aa23.03■■□□□ 1.28
U2AF1-206ENST00000464750 PSMB1P20618 241 aaKnown RBP23.02■■□□□ 1.28
U2AF1-206ENST00000464750 SYPL1Q16563 259 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 PDCD4Q53EL6 469 aaKnown RBP23.02■■□□□ 1.28
U2AF1-206ENST00000464750 AP1ARQ63HQ0 302 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 DNAJC14Q6Y2X3 702 aaPredicted RBP23.02■■□□□ 1.28
U2AF1-206ENST00000464750 MAVSQ7Z434 540 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 ZNF563Q8TA94 476 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 PNPT1Q8TCS8 783 aaKnown RBP23.02■■□□□ 1.28
U2AF1-206ENST00000464750 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.02■■□□□ 1.28
U2AF1-206ENST00000464750 KLHL9Q9P2J3 617 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 GPR52Q9Y2T5 361 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 DSCAMO60469 2012 aa23.02■■□□□ 1.28
U2AF1-206ENST00000464750 ROS1P08922 2347 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 CLDN24A6NM45 220 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 SMAD9O15198 467 aaKnown RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 YES1P07947 543 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 RYKP34925 604 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 KCNJ10P78508 379 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 TXNL4AP83876 142 aaKnown RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 PLAURQ03405 335 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 BEX5Q5H9J7 111 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 CXorf67Q86X51 503 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 SLC25A43Q8WUT9 341 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 TRNT1Q96Q11 434 aaKnown RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 PSD2Q9BQI7 771 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 TACO1Q9BSH4 297 aaKnown RBP23.01■■□□□ 1.27
U2AF1-206ENST00000464750 OR10A4Q9H209 315 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 SLC38A1Q9H2H9 487 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 EXOSC3Q9NQT5 275 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms