RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CD180Q99467 661 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 TEAD3Q99594 435 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MENTQ9BUN1 341 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 HCAR1Q9BXC0 346 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ACTRT3Q9BYD9 372 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MTG2Q9H4K7 406 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CACYBPQ9HB71 228 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 GPN1Q9HCN4 374 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 SIDT1Q9NXL6 827 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 NKIRAS2Q9NYR9 191 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 TAS2R5Q9NYW4 299 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 KLHL9Q9P2J3 617 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CES1P1Q9UKY3 287 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 BAIAP2Q9UQB8 552 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 RCE1Q9Y256 329 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SLC35A3Q9Y2D2 325 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 A0A0B4J203 849 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PR48 441 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 TRAPPC13A5PLN9 417 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 ANTXRLA6NF34 631 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 K7ESM1 405 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 AIPO00170 330 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 RFXAPO00287 272 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 ARPC1BO15143 372 aaKnown RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 PRKRAO75569 313 aaKnown RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 ERAL1O75616 437 aaKnown RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 RP2O75695 350 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 KRT33AO76009 404 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 AGR2O95994 175 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 F3P13726 295 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 PPP3CBP16298 524 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SYN1P17600 705 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 BMP7P18075 431 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 MAT2AP31153 395 aaKnown RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 ACVR1BP36896 505 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 MNDAP41218 407 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 ZNF157P51786 506 aaPredicted RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 PDX1P52945 283 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 OR12D2P58182 307 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 STXBP1P61764 594 aaKnown RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 FOXK2Q01167 660 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 HTR4Q13639 388 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 HLXQ14774 488 aaPredicted RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 CDK5R1Q15078 307 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 PUS10Q3MIT2 529 aaKnown RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 C9orf64Q5T6V5 341 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SFRP4Q6FHJ7 346 aaPredicted RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 SLC48A1Q6P1K1 146 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 ZNF836Q6ZNA1 936 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 FRRS1Q6ZNA5 592 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 CFAP77Q6ZQR2 320 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 LINGO2Q7L985 606 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 PRSS45Q7RTY3 260 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 RANBP3LQ86VV4 465 aaPredicted RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 CMTM4Q8IZR5 234 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SLC39A11Q8N1S5 342 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SYS1Q8N2H4 156 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SLC43A2Q8N370 569 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 BVESQ8NE79 360 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 OR5J2Q8NH18 312 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 ZNF671Q8TAW3 534 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SMPDL3BQ92485 455 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 IRF7Q92985 503 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 PMEPA1Q969W9 287 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SMIM19Q96E16 107 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 GIMAP5Q96F15 307 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 CXorf58Q96LI9 332 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 PRSS27Q9BQR3 290 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SLC46A2Q9BY10 475 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 OR10A4Q9H209 315 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 SLC6A15Q9H2J7 730 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 MTHFD2LQ9H903 347 aaPredicted RBP6.76□□□□□ -1.33
USP48-206ENST00000464577 BEX1Q9HBH7 125 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 NRIP3Q9NQ35 241 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 CLEC4AQ9UMR7 237 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 FLVCR2Q9UPI3 526 aa6.76□□□□□ -1.33
USP48-206ENST00000464577 A0A0G2JN53 185 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PRU2 124 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ANKRD20A5PA0PJZ0 165 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 DUXAA6NLW8 204 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 RIIAD1A6NNX1 92 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PDCD5O14737 125 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SUSD5O60279 629 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 LCMT2O60294 686 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 RGS11O94810 467 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 LYPD3O95274 346 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 AIFM1O95831 613 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 HIST1H2ABP04908 130 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 THBS1P07996 1170 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PRG2P13727 222 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MAKP20794 623 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 HIST1H1TP22492 207 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 PSMB5P28074 263 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TEAD1P28347 426 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 S100A11P31949 105 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PYCR1P32322 319 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MPIP34949 423 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MC3RP41968 323 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms