RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 IGHV3-23P01764 117 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 SEMG1P04279 462 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 OR8U8P0C7N1 319 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 RNH1P13489 461 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 ZNF44P15621 663 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 IGLL1P15814 213 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 PSMB1P20618 241 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 GLRA2P23416 452 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 HOXD10P28358 340 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 NTSP30990 170 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 OR3A4PP47883 348 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 P2RY1P47900 373 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 HNMTP50135 292 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 HNRNPA3P51991 378 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 GBX2P52951 348 aaPredicted RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 ARFIP1P53367 373 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 CUL1Q13616 776 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 GANABQ14697 944 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 CFAP221Q4G0U5 840 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 C10orf120Q5SQS8 335 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 ATL3Q6DD88 541 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 CCDC137Q6PK04 289 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 TBC1D21Q8IYX1 336 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 CLEC4FQ8N1N0 589 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 OR52M1Q8NGK5 317 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 OR5L2Q8NGL0 311 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 OR4D5Q8NGN0 318 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 OR1F12Q8NHA8 337 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 FBXO30Q8TB52 745 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 PELI1Q96FA3 418 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 B3GALT6Q96L58 329 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 MCHR1Q99705 422 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 SLC35A5Q9BS91 424 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 NIPSNAP3BQ9BS92 247 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 SRXN1Q9BYN0 137 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 CHIAQ9BZP6 476 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 NT5C3AQ9H0P0 336 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 GORASP2Q9H8Y8 452 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 ISG20L2Q9H9L3 353 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 SLC17A5Q9NRA2 495 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 NUDT15Q9NV35 164 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 PIPOXQ9P0Z9 390 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 WARS2Q9UGM6 360 aaKnown RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 RASD1Q9Y272 281 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 SLCO1B1Q9Y6L6 691 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 PTCH1Q13635 1447 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 PNPLA6Q8IY17 1366 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 LRRK1Q38SD2 2015 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 IGHV7-81A0A0B4J1V7 117 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 METTL21EPA6NDL7 271 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 E7ENQ6 273 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 PRRG1O14668 218 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ARPC3O15145 178 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 TAPBPO15533 448 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 MTX2O75431 263 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 LALBAP00709 142 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 HSPB1P04792 205 aaKnown RBP2.97□□□□□ -1.93
CLK1-208ENST00000464454 ALOX5P09917 674 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 DUX4L4P0CJ87 422 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 PNMTP11086 282 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 YWHABP31946 246 aaKnown RBP2.97□□□□□ -1.93
CLK1-208ENST00000464454 PLK1P53350 603 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 DIO3P55073 304 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 RIPPLY3P57055 190 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 MAP2K1Q02750 393 aaPredicted RBP2.97□□□□□ -1.93
CLK1-208ENST00000464454 CHRNB3Q05901 458 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ELAVL3Q14576 367 aaKnown RBP2.97□□□□□ -1.93
CLK1-208ENST00000464454 TP53I3Q53FA7 332 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 BEND3Q5T5X7 828 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 PPP1R27Q86WC6 154 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 CCDC50Q8IVM0 306 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 SKA3Q8IX90 412 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 NRMQ8IXM6 262 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 SVOPLQ8N434 492 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ANKRD49Q8WVL7 239 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 MRPS31Q92665 395 aaKnown RBP2.97□□□□□ -1.93
CLK1-208ENST00000464454 NEIL2Q969S2 332 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 MAGEB18Q96M61 343 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 IL4I1Q96RQ9 567 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ZNF184Q99676 751 aaPredicted RBP2.97□□□□□ -1.93
CLK1-208ENST00000464454 CNPY3Q9BT09 278 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 SPATA16Q9BXB7 569 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 RHBGQ9H310 441 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 PTGES2Q9H7Z7 377 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 SIGLEC8Q9NYZ4 499 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ONECUT1Q9UBC0 465 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ERVW-1Q9UQF0 538 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 ATRXP46100 2492 aa2.97□□□□□ -1.93
CLK1-208ENST00000464454 CLSPNQ9HAW4 1339 aa2.96□□□□□ -1.93
CLK1-208ENST00000464454 LRP5LA4QPB2 252 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 KIF2AO00139 706 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 PRKYO43930 277 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 SNNO75324 88 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 SCGNO76038 276 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 LYPD3O95274 346 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 HSMCR30P0CW71 290 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 POLR2EP19388 210 aaKnown RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 IMPDH1P20839 514 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 ZBTB25P24278 435 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 MMP11P24347 488 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms