RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 HDDC3Q8N4P3 179 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CELF5Q8N6W0 485 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ZFP41Q8N8Y5 198 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR10H4Q8NGA5 316 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR4F15Q8NGB8 312 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR11H4Q8NGC9 324 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR6C4Q8NGE1 309 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR51G2Q8NGK0 314 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 OR6T1Q8NGN1 323 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF461Q8TAF7 563 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CNOT9Q92600 299 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MRPS31Q92665 395 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 RAB8BQ92930 207 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 HIST1H2ACQ93077 130 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 TM4SF18Q96CE8 201 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 LINC00615Q96LM1 132 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 HS6ST2Q96MM7 605 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ZFP3Q96NJ6 502 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 NECTIN4Q96NY8 510 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ABHD1Q96SE0 405 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CD180Q99467 661 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 PDCD10Q9BUL8 212 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 RAB11FIP5Q9BXF6 653 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MS4A8Q9BY19 250 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 GPR62Q9BZJ7 368 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC6A17Q9H1V8 727 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 ZDHHC6Q9H6R6 413 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 EGLN3Q9H6Z9 239 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 MVB12BQ9H7P6 319 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 DDX31Q9H8H2 851 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 WASH6PQ9NQA3 447 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC35C2Q9NQQ7 365 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 TEX10Q9NXF1 929 aaPredicted RBP6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 TAS2R10Q9NYW0 307 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 SPG21Q9NZD8 308 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 GPR34Q9UPC5 381 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 PLCL2Q9UPR0 1127 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 CA5BQ9Y2D0 317 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 KCNK7Q9Y2U2 307 aa6.68□□□□□ -1.34
CLSTN1-204ENST00000464286 NUP210Q8TEM1 1887 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CIB4A0PJX0 185 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SMIM30A4D0T7 59 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 OR2AG2A6NM03 316 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 A8MX80 341 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 MCRIP1C9JLW8 97 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 F5H5P2 479 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 K7ERQ8 282 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 PRRG1O14668 218 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NPC1O15118 1278 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SEPT4O43236 478 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SIGLEC6O43699 453 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SDC3O75056 442 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SCO1O75880 301 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 DDNO94850 711 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF432O94892 652 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NDUFB6O95139 128 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 VNN2O95498 520 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 OLFM2O95897 454 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 IFNA4P05014 189 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 ALDOBP05062 364 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 PROS1P07225 676 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NMBP08949 121 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CSF1P09603 554 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 UCHL1P09936 223 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 GNSP15586 552 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 RPA2P15927 270 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CSNK2A2P19784 350 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 BMP8BP34820 402 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 MPIP34949 423 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 TRIM23P36406 574 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 PSMD4P55036 377 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC7A9P82251 487 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 REEP5Q00765 189 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CRYZQ08257 329 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 HTR4Q13639 388 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC9A5Q14940 896 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 RTP2Q5QGT7 225 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF626Q68DY1 528 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 ARHGAP11AQ6P4F7 1023 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 TMEM220Q6QAJ8 160 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CFAP77Q6ZQR2 320 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 TMUB2Q71RG4 321 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 LINGO2Q7L985 606 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SZRD1Q7Z422 152 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 BCDIN3DQ7Z5W3 292 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 BMP8AQ7Z5Y6 402 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NPAS4Q8IUM7 802 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 LURAP1LQ8IV03 231 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CPOQ8IVL8 374 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 CDH26Q8IXH8 852 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 APCDD1Q8J025 514 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 LNX2Q8N448 690 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 RASGEF1AQ8N9B8 481 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 OR5M9Q8NGP3 310 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 OR6K3Q8NGY3 331 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 OR4C6Q8NH72 309 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 LILRB1Q8NHL6 650 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 FANK1Q8TC84 345 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms