RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 MAPK1P28482 360 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 SOAT1P35610 550 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 RPS26P62854 115 aaKnown RBP13.54□□□□□ -0.24
CMSS1-202ENST00000463526 CBFBQ13951 182 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 PTGR1Q14914 329 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 GPR68Q15743 365 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 LSM12Q3MHD2 195 aaKnown RBP13.54□□□□□ -0.24
CMSS1-202ENST00000463526 UGT3A2Q3SY77 523 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 PDZK1Q5T2W1 519 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 PODNL1Q6PEZ8 512 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 RNF165Q6ZSG1 346 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 HIPK1Q86Z02 1210 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 UBE2J2Q8N2K1 259 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 HTRA1Q92743 480 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 ARL8AQ96BM9 186 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 USB1Q9BQ65 265 aaKnown RBP13.54□□□□□ -0.24
CMSS1-202ENST00000463526 RHNO1Q9BSD3 238 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 TRMOQ9BU70 441 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 BARX1Q9HBU1 254 aaPredicted RBP13.54□□□□□ -0.24
CMSS1-202ENST00000463526 FAIMQ9NVQ4 179 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 NPAP1Q9NZP6 1156 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 MID2Q9UJV3 735 aa13.54□□□□□ -0.24
CMSS1-202ENST00000463526 CR1P17927 2039 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 IGHV4-30-2A0A087WSY4 118 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 A0A1W2PR80 420 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 A8MV72 311 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-202ENST00000463526 NPIPB9F8W1W9 429 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 EIF4E2O60573 245 aaKnown RBP13.53□□□□□ -0.24
CMSS1-202ENST00000463526 CYTIPO60759 359 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 RAD51DO75771 328 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 ALDH3A1P30838 453 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
CMSS1-202ENST00000463526 NUDT6P53370 316 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 CHRNEQ04844 493 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 CHRFAM7AQ494W8 412 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-202ENST00000463526 SLC25A53Q5H9E4 307 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 AGAP6Q5VW22 663 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 IL23RQ5VWK5 629 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 DNAJC14Q6Y2X3 702 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-202ENST00000463526 DNM1P46Q6ZS02 220 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 GALNT5Q7Z7M9 940 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 CLEC4FQ8N1N0 589 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-202ENST00000463526 PPP3R2Q96LZ3 170 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 SDF2Q99470 211 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 MECRQ9BV79 373 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 CACNG6Q9BXT2 260 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 POU2F3Q9UKI9 436 aa13.53□□□□□ -0.24
CMSS1-202ENST00000463526 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.24
CMSS1-202ENST00000463526 CIB4A0PJX0 185 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 TLDC2A0PJX2 215 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 FAM234BA2RU67 622 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 CCT8L1PA6NM43 557 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ESPNB1AK53 854 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 THBS1P07996 1170 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 FGF4P08620 206 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 UBTFL6P0CB48 400 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-202ENST00000463526 TFPIP10646 304 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ZNF83P51522 516 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 CASP9P55211 416 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 SESN3P58005 492 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 IRX1P78414 480 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-202ENST00000463526 MERTKQ12866 999 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ATP6AP1LQ52LC2 224 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 C3orf33Q6P1S2 294 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 SLC22A25Q6T423 547 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ZCCHC23Q6ZST2 131 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 DTX2Q86UW9 622 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ZNF433Q8N7K0 673 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-202ENST00000463526 FNDC5Q8NAU1 212 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 SFXN5Q8TD22 340 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 C3orf30Q96M34 536 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ADAD1Q96M93 576 aaKnown RBP13.52□□□□□ -0.25
CMSS1-202ENST00000463526 PRPF18Q99633 342 aaKnown RBP13.52□□□□□ -0.25
CMSS1-202ENST00000463526 C1QTNF6Q9BXI9 259 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 LAT2Q9GZY6 243 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 SERINC1Q9NRX5 453 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 MKLN1Q9UL63 735 aa13.52□□□□□ -0.25
CMSS1-202ENST00000463526 CENPVL1A0A0U1RR11 272 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 ZNF724A8MTY0 619 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 E7EQL1 145 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 SULT2B1O00204 365 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 FCMRO60667 390 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 SKAP2O75563 359 aaPredicted RBP13.51□□□□□ -0.25
CMSS1-202ENST00000463526 MATN1P21941 496 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 DIO1P49895 249 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 SPOCK1Q08629 439 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 TMPPEQ6ZT21 453 aa13.51□□□□□ -0.25
CMSS1-202ENST00000463526 LSRQ86X29 649 aaPredicted RBP13.51□□□□□ -0.25
CMSS1-202ENST00000463526 PSMA8Q8TAA3 256 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms