RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CLDN4O14493 209 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 BCKDKO14874 412 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 ADAMDEC1O15204 470 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 CDC40O60508 579 aaKnown RBP eCLIP4.29□□□□□ -1.72
COPS3-204ENST00000462236 PLOD3O60568 738 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 WDR1O75083 606 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 RSL1D1O76021 490 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 SIX3O95343 332 aaPredicted RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 C1orf105O95561 183 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 FTH1P02794 183 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 UQCRHP07919 91 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SNRNP70P08621 437 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 SKILP12757 684 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PAX1P15863 534 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 RFC3P40938 356 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 NR2C2P49116 596 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PDLIM4P50479 330 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 ASCL1P50553 236 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 GEMP55040 296 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PLIN5Q00G26 463 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 OC90Q02509 493 aaPredicted RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 KLHL30Q0D2K2 578 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 GAGE5Q13069 117 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 GAGE6Q13070 117 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PTK6Q13882 451 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 GTF2H2Q13888 395 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 HYAL4Q2M3T9 481 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 CCSMST1Q4G0I0 132 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SFT2D3Q587I9 215 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 KCTD11Q693B1 232 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 GTF2H2CQ6P1K8 395 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PODNL1Q6PEZ8 512 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 C16orf47Q6ZP98 133 aaPredicted RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 MEPCEQ7L2J0 689 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 PRSS41Q7RTY9 318 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 VN1R4Q7Z5H5 301 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SATL1Q86VE3 508 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 EXOC3L1Q86VI1 746 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SLC13A5Q86YT5 568 aaPredicted RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 KIF2BQ8N4N8 673 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 APCDD1LQ8NCL9 501 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PAPD5Q8NDF8 572 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 OR51Q1Q8NH59 317 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 LKAAEAR1Q8TD35 194 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 DUSP19Q8WTR2 217 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 TFB1MQ8WVM0 346 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 METTL21AQ8WXB1 218 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SMPDL3BQ92485 455 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 SLCO2A1Q92959 643 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 TMCO6Q96DC7 493 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 DPH7Q9BTV6 452 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 CARD6Q9BX69 1037 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 GBA3Q9H227 469 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 CPSF2Q9P2I0 782 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 CIDEBQ9UHD4 219 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PPIEQ9UNP9 301 aaKnown RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 A0A087X0T9 212 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 IGKV3D-11A0A0A0MRZ8 115 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 A0A0G2JMM0 328 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 A0A1W2PPB8 328 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 A0A1W2PRS3 328 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 PLSCR5A0PG75 271 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 LRRD1A4D1F6 860 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 SAGE2PA6NJ88 616 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 KIR3DP1A8MWS1 328 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 J3QR06 171 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 TXNDC9O14530 226 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 NDC80O14777 642 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 PLPP2O43688 288 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 OR1I1O60431 355 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 ANXA9O76027 345 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 PDE9AO76083 593 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 RPN2P04844 631 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 TPM2P07951 284 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 ANXA5P08758 320 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 FAM228BP0C875 321 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 ERVK-10P10266 1014 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 MYOD1P15172 320 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 EZRP15311 586 aaKnown RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 CDKN2BP42772 138 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 XCR1P46094 333 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 ZNF136P52737 540 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 UBE2HP62256 183 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 RELQ04864 619 aaPredicted RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 C1orf185Q5T7R7 199 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 LRRC38Q5VT99 294 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 SUSD1Q6UWL2 747 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 MFSD7Q6UXD7 560 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 RGS9BPQ6ZS82 235 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 RBM43Q6ZSC3 357 aaKnown RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 BZW1Q7L1Q6 419 aaKnown RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 PID1Q7Z2X4 250 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 OR8H2Q8N162 312 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 C1orf52Q8N6N3 182 aaKnown RBP4.28□□□□□ -1.72
COPS3-204ENST00000462236 OR2M7Q8NG81 312 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 OR5M9Q8NGP3 310 aa4.28□□□□□ -1.72
COPS3-204ENST00000462236 OR10Q1Q8NGQ4 319 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms