RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TBL1XO60907 577 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 TSC22D2O75157 780 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 LYPLA1O75608 230 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SCRG1O75711 98 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 GPX5O75715 221 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 LGALS2P05162 132 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 CAPN1P07384 714 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 MMP11P24347 488 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 ADORA2BP29275 332 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 FGF9P31371 208 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 MAP3K8P41279 467 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 P2RY1P47900 373 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 CCT3P49368 545 aaKnown RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 MEOX2P50222 304 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 DAP3P51398 398 aaKnown RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 CRYBB1P53674 252 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 ST3GAL3Q11203 375 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 DPYSL2Q16555 572 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SLC25A52Q3SY17 297 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 CFAP221Q4G0U5 840 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 EOGTQ5NDL2 527 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 WSCD1Q658N2 575 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 FAM199XQ6PEV8 388 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 WDR74Q6RFH5 385 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 VITQ6UXI7 678 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 EFL1Q7Z2Z2 1120 aaKnown RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 C17orf82Q86X59 251 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 NAXDQ8IW45 347 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SLC35F2Q8IXU6 374 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 EIF1ADQ8N9N8 165 aaKnown RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 FAM83FQ8NEG4 500 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 ANKRD49Q8WVL7 239 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 BADQ92934 168 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 FAM122AQ96E09 287 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 PELI1Q96FA3 418 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 TMEM43Q9BTV4 400 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 EDEM2Q9BV94 578 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 RHBGQ9H310 441 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 LRRN3Q9H3W5 708 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SGK2Q9HBY8 427 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SLC17A5Q9NRA2 495 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SLC7A10Q9NS82 523 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 B3GNT2Q9NY97 397 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 WARS2Q9UGM6 360 aaKnown RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF107Q9UII5 783 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 PHF11Q9UIL8 331 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 RIMS3Q9UJD0 308 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 KLHL21Q9UJP4 597 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 PIGLQ9Y2B2 252 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 PPIAL4AQ9Y536 164 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 ANKRD30BQ9BXX2 1392 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 A0A1B0GWB2 263 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 TRDCB7Z8K6 153 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 H0Y8G0 127 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SULT2B1O00204 365 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 RS1O15537 224 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CLDN9O95484 217 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 AP2A1O95782 977 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CA1P00915 261 aaPredicted RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CCDC130P13994 396 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 IGLL1P15814 213 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 COX5AP20674 150 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ANXA13P27216 316 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 EPHX2P34913 555 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 LEPP41159 167 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 STARP49675 285 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SULT1E1P49888 294 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 AIF1P55008 147 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ATP5IP56385 69 aaPredicted RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 RIPPLY3P57055 190 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 DDX39BQ13838 428 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ELAVL3Q14576 367 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 KIAA0040Q15053 153 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ZMYND11Q15326 602 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 LRRC36Q1X8D7 754 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 PRR30Q53SZ7 412 aaPredicted RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SFT2D3Q587I9 215 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 OR2B11Q5JQS5 317 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF774Q6NX45 483 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 KCNIP4Q6PIL6 250 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CCDC137Q6PK04 289 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 FRA10AC1Q70Z53 315 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 UTS2BQ765I0 119 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ARCQ7LC44 396 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 VSTM4Q8IW00 320 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 NRMQ8IXM6 262 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 LINC01561Q8N1V8 128 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SVOPLQ8N434 492 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 KIR3DL3Q8N743 410 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 OR51G2Q8NGK0 314 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 TYMSOSQ8TAI1 123 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 MRAPQ8TCY5 172 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 ARNTL2Q8WYA1 636 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 RPL3LQ92901 407 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 SEC22AQ96IW7 307 aa2.28□□□□□ -2.04
HDAC6-212ENST00000461608 CELF6Q96J87 481 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 RBM14Q96PK6 669 aaKnown RBP2.28□□□□□ -2.04
HDAC6-212ENST00000461608 PSKH2Q96QS6 385 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms