RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
PABPC4-208ENST00000461578 CDC73Q6P1J9 531 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 BHLHB9Q6PI77 547 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 ZNF527Q8NB42 609 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
PABPC4-208ENST00000461578 BTBD2Q9BX70 525 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 QRSL1Q9H0R6 528 aaKnown RBP12.05□□□□□ -0.48
PABPC4-208ENST00000461578 ASB6Q9NWX5 421 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 EMC3Q9P0I2 261 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 SH3BP4Q9P0V3 963 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
PABPC4-208ENST00000461578 ACTL7BQ9Y614 415 aa12.05□□□□□ -0.48
PABPC4-208ENST00000461578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
PABPC4-208ENST00000461578 H3BNH8 94 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 ZNF23P17027 643 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 ATP5F1P24539 256 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-208ENST00000461578 DIO1P49895 249 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 LASP1Q14847 261 aaKnown RBP12.04□□□□□ -0.48
PABPC4-208ENST00000461578 GABRA6Q16445 453 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 KLHL26Q53HC5 615 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 C3orf33Q6P1S2 294 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 CCNYL1Q8N7R7 359 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 OR52E4Q8NGH9 312 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 FAM76AQ8TAV0 307 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 DCAKDQ8WVC6 231 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 PPCDCQ96CD2 204 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 IQCGQ9H095 443 aaKnown RBP12.04□□□□□ -0.48
PABPC4-208ENST00000461578 OCEL1Q9H607 264 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 TAS2R16Q9NYV7 291 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 TMEFF2Q9UIK5 374 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-208ENST00000461578 MOKQ9UQ07 419 aa12.04□□□□□ -0.48
PABPC4-208ENST00000461578 WBP11Q9Y2W2 641 aaKnown RBP12.04□□□□□ -0.48
PABPC4-208ENST00000461578 LOC390937A0A1W2PQ73 354 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 SULT2B1O00204 365 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 SEC22BO75396 215 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 CRCPO75575 148 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 CYP7B1O75881 506 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 RSL1D1O76021 490 aaKnown RBP12.03□□□□□ -0.48
PABPC4-208ENST00000461578 VENTXO95231 258 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 HSPA4LO95757 839 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 ITGA5P08648 1049 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 EGR1P18146 543 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 IL2RGP31785 369 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 NTF4P34130 210 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 PRKAA2P54646 552 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 SNRPD2P62316 118 aaKnown RBP12.03□□□□□ -0.48
PABPC4-208ENST00000461578 SLC25A3Q00325 362 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 SWI5Q1ZZU3 235 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 TIGD2Q4W5G0 525 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 ABLIM2Q6H8Q1 611 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 RINLQ6ZS11 566 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 SLC46A3Q7Z3Q1 461 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 WDR31Q8NA23 367 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 CLHC1Q8NHS4 586 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 FAM120BQ96EK7 910 aaKnown RBP12.03□□□□□ -0.48
PABPC4-208ENST00000461578 L3HYPDHQ96EM0 354 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 TSSK3Q96PN8 268 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 CDC42EP4Q9H3Q1 356 aaKnown RBP12.03□□□□□ -0.48
PABPC4-208ENST00000461578 GSTO2Q9H4Y5 243 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 ZCCHC3Q9NUD5 404 aaKnown RBP12.03□□□□□ -0.48
PABPC4-208ENST00000461578 ZDHHC18Q9NUE0 388 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 KCNE3Q9Y6H6 103 aa12.03□□□□□ -0.48
PABPC4-208ENST00000461578 TENM1Q9UKZ4 2725 aa12.02□□□□□ -0.48
PABPC4-208ENST00000461578 SLU7O95391 586 aaKnown RBP12.02□□□□□ -0.49
PABPC4-208ENST00000461578 HMGN2P05204 90 aaKnown RBP12.02□□□□□ -0.49
PABPC4-208ENST00000461578 TFPIP10646 304 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 ACTG1P63261 375 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 CBFBQ13951 182 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 SLC25A53Q5H9E4 307 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 EXOSC6Q5RKV6 272 aaKnown RBP12.02□□□□□ -0.49
PABPC4-208ENST00000461578 DCST2Q5T1A1 773 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 OR7E24Q6IFN5 339 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 ZCCHC12Q6PEW1 402 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 TMPPEQ6ZT21 453 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 SLC22A9Q8IVM8 553 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 TOR1AIP2Q8NFQ8 470 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 OR5W2Q8NH69 310 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 MUS81Q96NY9 551 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 THUMPD3Q9BV44 507 aaKnown RBP12.02□□□□□ -0.49
PABPC4-208ENST00000461578 BHLHE41Q9C0J9 482 aaPredicted RBP12.02□□□□□ -0.49
PABPC4-208ENST00000461578 HOXD1Q9GZZ0 328 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 REEP4Q9H6H4 257 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 RRAGDQ9NQL2 400 aaPredicted RBP12.02□□□□□ -0.49
PABPC4-208ENST00000461578 DUSP22Q9NRW4 184 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 DTNAQ9Y4J8 743 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 PTGDR2Q9Y5Y4 395 aa12.02□□□□□ -0.49
PABPC4-208ENST00000461578 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
PABPC4-208ENST00000461578 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
PABPC4-208ENST00000461578 ZNF716A6NP11 495 aa12.01□□□□□ -0.49
PABPC4-208ENST00000461578 ZNF264O43296 627 aa12.01□□□□□ -0.49
PABPC4-208ENST00000461578 MRPL33O75394 65 aaKnown RBP12.01□□□□□ -0.49
PABPC4-208ENST00000461578 RGS9O75916 674 aaPredicted RBP12.01□□□□□ -0.49
PABPC4-208ENST00000461578 GSTA1P08263 222 aa12.01□□□□□ -0.49
PABPC4-208ENST00000461578 SNRPAP09012 282 aaKnown RBP12.01□□□□□ -0.49
PABPC4-208ENST00000461578 UBL4AP11441 157 aa12.01□□□□□ -0.49
PABPC4-208ENST00000461578 APEX1P27695 318 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms