RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PDLIM4P50479 330 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 FOXA1P55317 472 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 CHRNB3Q05901 458 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 SF3A3Q12874 501 aaKnown RBP eCLIP15.21■□□□□ 0.032e-6■■■□□ 19.1
TOP3A-202ENST00000461127 PDCD2Q16342 344 aaPredicted RBP15.21■□□□□ 0.03
TOP3A-202ENST00000461127 GRAMD1BQ3KR37 738 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 KLHL17Q6TDP4 642 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 FCRLAQ7L513 359 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 SGMS2Q8NHU3 365 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 ACTRT2Q8TDY3 377 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 ELAC2Q9BQ52 826 aaKnown RBP15.21■□□□□ 0.03
TOP3A-202ENST00000461127 SIKE1Q9BRV8 207 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 PIMREGQ9BSJ6 248 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 MED17Q9NVC6 651 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 DCTN4Q9UJW0 460 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 ZNF225Q9UK10 706 aa15.21■□□□□ 0.03
TOP3A-202ENST00000461127 A0A0G2JND7 137 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 GOLGA8QA0A0J9YX86 632 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 GOLGA8OA6NCC3 632 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 GJE1A6NN92 205 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 GOLGA8NF8WBI6 632 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 NDUFS8O00217 210 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 MANBAO00462 879 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 SKAP2O75563 359 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-202ENST00000461127 FAM107AO95990 144 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 TGFAP01135 160 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 ITGA2P17301 1181 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 PTAFRP25105 342 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 PSMA4P25789 261 aaKnown RBP15.2■□□□□ 0.02
TOP3A-202ENST00000461127 AQP5P55064 265 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 CR1LQ2VPA4 569 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 PLPPR5Q32ZL2 321 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 ZNF544Q6NX49 715 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 APOOLQ6UXV4 268 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 SPATA21Q7Z572 469 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 DDIASQ8IXT1 998 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 SLC43A2Q8N370 569 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 TWIST2Q8WVJ9 160 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 C3orf49Q96BT1 292 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 C1orf159Q96HA4 380 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 DDX18Q9NVP1 670 aaKnown RBP15.2■□□□□ 0.02
TOP3A-202ENST00000461127 NPAP1Q9NZP6 1156 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 KLHL14Q9P2G3 628 aa15.2■□□□□ 0.02
TOP3A-202ENST00000461127 C19orf53Q9UNZ5 99 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-202ENST00000461127 TTC36A6NLP5 189 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 ZNF814B7Z6K7 855 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 ALG1L2C9J202 215 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 NDUFAB1O14561 156 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 PCDH7O60245 1069 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 ULK1O75385 1050 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 SRP14P37108 136 aaKnown RBP15.19■□□□□ 0.02
TOP3A-202ENST00000461127 EIF1P41567 113 aaKnown RBP15.19■□□□□ 0.02
TOP3A-202ENST00000461127 OR3A2P47893 321 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 GKAP1Q5VSY0 366 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-202ENST00000461127 CGB2Q6NT52 195 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 TMEM107Q6UX40 140 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-202ENST00000461127 RFWD2Q8NHY2 731 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 PPP1R36Q96LQ0 422 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 NPAS1Q99742 590 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 PRR14Q9BWN1 585 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 NUF2Q9BZD4 464 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 KLHL9Q9P2J3 617 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 DNAJC15Q9Y5T4 150 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 FKBP7Q9Y680 259 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 TENM1Q9UKZ4 2725 aa15.19■□□□□ 0.02
TOP3A-202ENST00000461127 OR5H1A6NKK0 313 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 PIP5K1BO14986 540 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 JUNP05412 331 aaKnown RBP15.18■□□□□ 0.02
TOP3A-202ENST00000461127 HSD3B1P14060 373 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 HSD3B2P26439 372 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 ELK4P28324 431 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 GABRA3P34903 492 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 NR4A2P43354 598 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 NCBP2P52298 156 aaKnown RBP eCLIP15.18■□□□□ 0.026e-7■□□□□ 10.1
TOP3A-202ENST00000461127 ARFIP2P53365 341 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 MANFP55145 182 aaKnown RBP15.18■□□□□ 0.02
TOP3A-202ENST00000461127 BTKQ06187 659 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 UGT3A2Q3SY77 523 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 BCAS4Q8TDM0 211 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 CCT7Q99832 543 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 LMF2Q9BU23 707 aaKnown RBP15.18■□□□□ 0.02
TOP3A-202ENST00000461127 SRXN1Q9BYN0 137 aa15.18■□□□□ 0.02
TOP3A-202ENST00000461127 MYO1GB0I1T2 1018 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 VWC2LB2RUY7 222 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 UPK1AO00322 258 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 SNX3O60493 162 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 PGM3O95394 542 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 LINC00032P0C843 101 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 HPGDP15428 266 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 HTR6P50406 440 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 IMPG1Q17R60 797 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 IQCCQ4KMZ1 466 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 FAM219BQ5XKK7 198 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 MISPQ8IVT2 679 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 GATSQ8NAP1 163 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 FAM110BQ8TC76 370 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 C16orf78Q8WTQ4 265 aa15.17■□□□□ 0.02
TOP3A-202ENST00000461127 SH3YL1Q96HL8 342 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-202ENST00000461127 INPP5KQ9BT40 448 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms