RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 APEX1P27695 318 aaKnown RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 RPL6Q02878 288 aaKnown RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 RIN1Q13671 783 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 EXOSC2Q13868 293 aaKnown RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 NDUFA9Q16795 377 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 SYT14P1Q58G82 188 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 DDI2Q5TDH0 399 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 KLBQ86Z14 1044 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 Q8N402 240 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 FAM98AQ8NCA5 519 aaKnown RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 LMX1AQ8TE12 382 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 UFD1Q92890 307 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 MMABQ96EY8 250 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 MS4A4EQ96PG1 132 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 ZC3H12DA2A288 527 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 CD8B2A6NJW9 211 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 FGF17O60258 216 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 CD8BP10966 210 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SDC2P34741 201 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ETV5P41161 510 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 CENPAP49450 140 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 MAZP56270 477 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SNRPNP63162 240 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SCRN3Q0VDG4 424 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 KIR2DS3Q14952 304 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 RNASE12Q5GAN4 147 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SAMD14Q8IZD0 417 aaPredicted RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 AVL9Q8NBF6 648 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SMAP2Q8WU79 429 aaPredicted RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 PTCHD1Q96NR3 888 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 NELL2Q99435 816 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF416Q9BWM5 594 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 RBFOX1Q9NWB1 397 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 DAPP1Q9UN19 280 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 A0A1W2PRQ8 180 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 H3BSH0 61 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 NDUFA2O43678 99 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 PLATP00750 562 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 MRPL2Q5T653 305 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 MFSD12Q6NUT3 480 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ARL9Q6T311 187 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 MARCH9Q86YJ5 346 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SYT14Q8NB59 555 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ZFPM2Q8WW38 1151 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 RFKQ969G6 155 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 MOAP1Q96BY2 351 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF582Q96NG8 517 aaPredicted RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 GAL3ST4Q96RP7 486 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 MS4A7Q9GZW8 240 aaPredicted RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ADAM30Q9UKF2 790 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 RP1P56715 2156 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 LYRM1O43325 122 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 TNFRSF17Q02223 184 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 ABI3BPQ7Z7G0 1075 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 KCTD7Q96MP8 289 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SERINC2Q96SA4 455 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 TAS2R7Q9NYW3 318 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 CNOT2Q9NZN8 540 aaKnown RBP14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SEC14L4Q9UDX3 406 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 CA14Q9ULX7 337 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
LMNB1-203ENST00000460265 TRAV27A0A087WT01 109 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 FAM86C2PA6NEL3 165 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 SLC3A1Q07837 685 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 IL18Q14116 193 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 FCN2Q15485 313 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.3□□□□□ -0.122e-7■□□□□ 9.8
LMNB1-203ENST00000460265 TSTD1Q8NFU3 115 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 OR2T33Q8NG76 320 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 OR4C6Q8NH72 309 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 TGM7Q96PF1 710 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 DAPL1A0PJW8 107 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 DRD1P21728 446 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 USP53Q70EK8 1073 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 GPAT4Q86UL3 456 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 PAQR7Q86WK9 346 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 OR52I1Q8NGK6 324 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 OR6M1Q8NGM8 313 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 OSTF1Q92882 214 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 LMAN2LQ9H0V9 348 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 TRPV4Q9HBA0 871 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 REV1Q9UBZ9 1251 aa14.3□□□□□ -0.12
LMNB1-203ENST00000460265 A0A1B0GVC2 190 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 GXYLT2A0PJZ3 443 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 A6NIN4 97 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 CASC3O15234 703 aaKnown RBP14.29□□□□□ -0.12
LMNB1-203ENST00000460265 PAHP00439 452 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 BLVRAP53004 296 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 AGERQ15109 404 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 DCST2Q5T1A1 773 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 GDF7Q7Z4P5 450 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ADGRG3Q86Y34 549 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 BBS1Q8NFJ9 593 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ACOT11Q8WXI4 607 aaPredicted RBP14.29□□□□□ -0.12
LMNB1-203ENST00000460265 LINC00052Q96N35 136 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 WACQ9BTA9 647 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 SLC6A15Q9H2J7 730 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 CDCP1Q9H5V8 836 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 RANBP3Q9H6Z4 567 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms