RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 QRSL1Q9H0R6 528 aaKnown RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 SDR39U1Q9NRG7 319 aaPredicted RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 ZNF226Q9NYT6 803 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 C6orf203Q9P0P8 240 aaPredicted RBP16.89■□□□□ 0.29
COL5A1-203ENST00000460264 SLC35A3Q9Y2D2 325 aa16.89■□□□□ 0.29
COL5A1-203ENST00000460264 FREM1Q5H8C1 2179 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 SLC22A3O75751 556 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 ATE1O95260 518 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 H6PDO95479 791 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 GSNP06396 782 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 PGCP20142 388 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 CRYGSP22914 178 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 SLC7A1P30825 629 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 SESN3P58005 492 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 TXNL4AP83876 142 aaKnown RBP16.88■□□□□ 0.29
COL5A1-203ENST00000460264 PLAURQ03405 335 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 RNPS1Q15287 305 aaKnown RBP16.88■□□□□ 0.29
COL5A1-203ENST00000460264 GTF2IRD2BQ6EKJ0 949 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 DNAJC14Q6Y2X3 702 aaPredicted RBP16.88■□□□□ 0.29
COL5A1-203ENST00000460264 ZNF621Q6ZSS3 439 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 FCRLAQ7L513 359 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 HMGN2P46Q86SG4 172 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 GTF2IRD2Q86UP8 949 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 TRNT1Q96Q11 434 aaKnown RBP16.88■□□□□ 0.29
COL5A1-203ENST00000460264 ALPK1Q96QP1 1244 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 OR52B2Q96RD2 323 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 KLHL4Q9C0H6 718 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 C12orf49Q9H741 205 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 KLHL13Q9P2N7 655 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 MTORP42345 2549 aa16.88■□□□□ 0.29
COL5A1-203ENST00000460264 A0A1W2PNR3 127 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 IL6P05231 212 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 CHRM4P08173 479 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 ANXA11P50995 505 aaKnown RBP16.87■□□□□ 0.29
COL5A1-203ENST00000460264 CHRNEQ04844 493 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 MERTKQ12866 999 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 KEAP1Q14145 624 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 SYPL1Q16563 259 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 GSTA3Q16772 222 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 COX20Q5RI15 118 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 STAC2Q6ZMT1 411 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 C22orf34Q6ZV56 151 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 STK32CQ86UX6 486 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 ANKFN1Q8N957 763 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 PNPT1Q8TCS8 783 aaKnown RBP16.87■□□□□ 0.29
COL5A1-203ENST00000460264 TMEM234Q8WY98 164 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 ZC3HAV1LQ96H79 300 aaKnown RBP16.87■□□□□ 0.29
COL5A1-203ENST00000460264 SLC38A1Q9H2H9 487 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 GP6Q9HCN6 339 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 SLC6A13Q9NSD5 602 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 ACER3Q9NUN7 267 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 ZIM2Q9NZV7 527 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 LIPT1Q9Y234 373 aa16.87■□□□□ 0.29
COL5A1-203ENST00000460264 RAI1Q7Z5J4 1906 aaPredicted RBP16.86■□□□□ 0.29
COL5A1-203ENST00000460264 CLDN24A6NM45 220 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 RFXANKO14593 260 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 DIAPH2O60879 1101 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 RAC3P60763 192 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 TMEM201Q5SNT2 666 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 ANKRD34AQ69YU3 496 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 BEND4Q6ZU67 534 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 PLEKHM3Q6ZWE6 761 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 OR5B2Q96R09 309 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 EXOSC3Q9NQT5 275 aaKnown RBP16.86■□□□□ 0.29
COL5A1-203ENST00000460264 USH1CQ9Y6N9 552 aa16.86■□□□□ 0.29
COL5A1-203ENST00000460264 FLNAP21333 2647 aaKnown RBP16.85■□□□□ 0.29
COL5A1-203ENST00000460264 IGHV3-15A0A0B4J1V0 119 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 AGAP5A6NIR3 686 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 UBDO15205 165 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 KRT75O95678 551 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 ENPP1P22413 925 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 KCNJ10P78508 379 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 TFAP2EQ6VUC0 442 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 TUSC5Q8IXB3 177 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 SLC43A2Q8N370 569 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 ARFGAP2Q8N6H7 521 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 OR9I1Q8NGQ6 314 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 SLC25A43Q8WUT9 341 aaPredicted RBP16.85■□□□□ 0.29
COL5A1-203ENST00000460264 PIK3IP1Q96FE7 263 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 ATP6V1G3Q96LB4 118 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 C7orf26Q96N11 449 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 CCDC106Q9BWC9 280 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 FANCFQ9NPI8 374 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 SERINC1Q9NRX5 453 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
COL5A1-203ENST00000460264 PRR14LQ5THK1 2151 aa16.85■□□□□ 0.29
COL5A1-203ENST00000460264 SMAD9O15198 467 aaKnown RBP16.84■□□□□ 0.29
COL5A1-203ENST00000460264 ADAM11O75078 769 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 PRKD3O94806 890 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 THBDP07204 575 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 ZCCHC18P0CG32 403 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 NR2F1P10589 423 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 PPP3CBP16298 524 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 CD53P19397 219 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 RPS4Y1P22090 263 aaKnown RBP16.84■□□□□ 0.29
COL5A1-203ENST00000460264 RYKP34925 604 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 MAGEA8P43361 318 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 POLR2JP52435 117 aaKnown RBP16.84■□□□□ 0.29
COL5A1-203ENST00000460264 MVDP53602 400 aa16.84■□□□□ 0.29
COL5A1-203ENST00000460264 DEFB113Q30KQ7 82 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms