RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OLIG3Q7RTU3 272 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 OVCH1Q7RTY7 1134 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 KCTD20Q7Z5Y7 419 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PXKQ7Z7A4 578 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 HMGN2P46Q86SG4 172 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SLITRK4Q8IW52 837 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 C7orf61Q8IZ16 206 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CA13Q8N1Q1 262 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF527Q8NB42 609 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 OR6C4Q8NGE1 309 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ZFAND1Q8TCF1 268 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 GPBAR1Q8TDU6 330 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 DEDD2Q8WXF8 326 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 AKAP1Q92667 903 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 KISS1RQ969F8 398 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SGTBQ96EQ0 304 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 NECTIN4Q96NY8 510 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 MNTQ99583 582 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 RNF32Q9H0A6 362 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 RERGLQ9H628 205 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 WDR70Q9NW82 654 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CPNE7Q9UBL6 633 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PRODH2Q9UF12 536 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 NUBP2Q9Y5Y2 271 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PRUNE2Q8WUY3 3088 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 A0A1B0GWA3 101 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 A0A1W2PS29 197 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 OR5K3A6NET4 321 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 POM121BA6NF01 834 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 INMT-MINDY4F8WBC2 141 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 IMPA2O14732 288 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 CTDSPLO15194 276 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 OGG1O15527 345 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 FLRT2O43155 660 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SSX4O60224 188 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 PTP4A3O75365 173 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SC5DO75845 299 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF432O94892 652 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 LALBAP00709 142 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 PNMTP11086 282 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 GLULP15104 373 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 POU3F3P20264 500 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 RAB3BP20337 219 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 MAKP20794 623 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 AK4P27144 223 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 MAPK3P27361 379 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SLC6A1P30531 599 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 TGM4P49221 684 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SLC16A1P53985 500 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SCAND1P57086 179 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 HOXC5Q00444 222 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 IFITM2Q01629 132 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 TNK1Q13470 666 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SERTAD2Q14140 314 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 EFR3AQ14156 821 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 FGFBP1Q14512 234 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 PON3Q15166 354 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SF3B4Q15427 424 aaKnown RBP eCLIP8.17□□□□□ -1.14e-7■■■■■ 35.9
HDAC3-202ENST00000459727 TRMT12Q53H54 448 aaKnown RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SLC6A19Q695T7 634 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 VASNQ6EMK4 673 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 RPL22L1Q6P5R6 122 aaKnown RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ARL9Q6T311 187 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 PARM1Q6UWI2 310 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 RD3Q7Z3Z2 195 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 NANOGNBQ7Z5D8 188 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 CEACAM19Q7Z692 300 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ABI3BPQ7Z7G0 1075 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 C11orf74Q86VG3 221 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ZFP41Q8N8Y5 198 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 BBS1Q8NFJ9 593 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 OR13C2Q8NGS9 318 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 PFN4Q8NHR9 129 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ABHD4Q8TB40 342 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ADAMTS14Q8WXS8 1223 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SMPDL3BQ92485 455 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 FAM3CQ92520 227 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 NACC2Q96BF6 587 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 SMIM19Q96E16 107 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 RBM18Q96H35 190 aaKnown RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 C4orf36Q96KX1 117 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 MRGPRX1Q96LB2 322 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 BMFQ96LC9 184 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 HYLS1Q96M11 299 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 GPX7Q96SL4 187 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 TMEM168Q9H0V1 697 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 MMP28Q9H239 520 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 DPAGT1Q9H3H5 408 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ERVMER34-1Q9H9K5 563 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 UCK1Q9HA47 277 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ADGRL4Q9HBW9 690 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ENAMQ9NRM1 1142 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 MSRAQ9UJ68 235 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 MRTO4Q9UKD2 239 aaKnown RBP8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ING4Q9UNL4 249 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF337Q9Y3M9 751 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 TRPM6Q9BX84 2022 aa8.17□□□□□ -1.1
HDAC3-202ENST00000459727 LINC00854A0A1B0GVQ3 168 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms