RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ANKRD61A6NGH8 418 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 SOX30O94993 753 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 ZNF81P51508 661 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 ZNF85Q03923 595 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 GALEQ14376 348 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 GID4Q8IVV7 300 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 OR51J1Q9H342 316 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 IL21RQ9HBE5 538 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 ING4Q9UNL4 249 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 A0A087WV48 116 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 J3QRE1 110 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 PRKNO60260 465 aaPredicted RBP18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 FAAP20Q6NZ36 180 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 ZNF433Q8N7K0 673 aaPredicted RBP18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 OR4K14Q8NGD5 310 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 FGF13Q92913 245 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 DNAJA3Q96EY1 480 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 C10orf90Q96M02 699 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 DERL3Q96Q80 235 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 OR14A2Q96R54 314 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 DPAGT1Q9H3H5 408 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 MEPEQ9NQ76 525 aaPredicted RBP18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 SLCO1C1Q9NYB5 712 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 STON1Q9Y6Q2 735 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 A0A0G2JK05 382 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 LEUTXA8MZ59 168 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 IDSB3KWA1 339 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 KAT7O95251 611 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 SBK2P0C263 348 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 RAB3BP20337 219 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 F8A1P23610 371 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 SLC36A2Q495M3 483 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 C2orf27AQ580R0 203 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 CREB3L2Q70SY1 520 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 OR4C6Q8NH72 309 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 SMARCD2Q92925 531 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 MOAP1Q96BY2 351 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 ZNF764Q96H86 408 aaPredicted RBP18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 ZFP64Q9NPA5 681 aa18.12■□□□□ 0.49
CNEP1R1-203ENST00000458059 LAMA1P25391 3075 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 DUXAA6NLW8 204 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 GNRH1P01148 92 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 GABRA3P34903 492 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 RPL6Q02878 288 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 DCST2Q5T1A1 773 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 HES5Q5TA89 166 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 FAAH2Q6GMR7 532 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TMEM52Q8NDY8 209 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 OR52E2Q8NGJ4 325 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 HDAC8Q9BY41 377 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 SPRTNQ9H040 489 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 ZNF346Q9UL40 294 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3DA0A087WVF3 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3IA0A087WXS9 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3EA0A087X179 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3KA0A087X1G2 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3FA6NER0 549 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 RIIAD1A6NNX1 92 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3LB9A6J9 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 CTSVO60911 334 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3HP0C7X1 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 NPR2P20594 1047 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 BMP8BP34820 402 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 EEF1A1P68104 462 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3GQ6DHY5 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TANGO2Q6ICL3 276 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3CQ6IPX1 549 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 BMP8AQ7Z5Y6 402 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 SFTPA2Q8IWL1 248 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 CCDC28AQ8IWP9 274 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 TBC1D3Q8IZP1 549 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 FAM98AQ8NCA5 519 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 GIMAP1Q8WWP7 306 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 ACOT12Q8WYK0 555 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 CNOT9Q92600 299 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 ADGRL4Q9HBW9 690 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 MED17Q9NVC6 651 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 EVA1BQ9NVM1 165 aa18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 EIF3KQ9UBQ5 218 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-203ENST00000458059 ADAM11O75078 769 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 HRGP04196 525 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 WNT1P04628 370 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 POLR2CP19387 275 aaPredicted RBP18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 ST3GAL2Q16842 350 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 NDUFAF6Q330K2 333 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 ASPGQ86U10 573 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 MFSD9Q8NBP5 474 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 TSACCQ96A04 125 aaPredicted RBP18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 OMA1Q96E52 524 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 PITHD1Q9GZP4 211 aaPredicted RBP18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 FOLH1BQ9HBA9 442 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 ADAM18Q9Y3Q7 739 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 POM121BA6NF01 834 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 RBMS1P29558 406 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 CRYZQ08257 329 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 ACSM1Q08AH1 577 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 PDGFRLQ15198 375 aa18.1■□□□□ 0.49
CNEP1R1-203ENST00000458059 TOR2AQ5JU69 321 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms