RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NPIPB9F8W1W9 429 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 EFNA2O43921 213 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 SNUPNO95149 360 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 CNOT4O95628 575 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 AGR2O95994 175 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 C8BP07358 591 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 UBTFL6P0CB48 400 aaPredicted RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 OR12D1P0DN82 309 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 TIGD2Q4W5G0 525 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 ANXA8L1Q5VT79 327 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 TNFAIP8L2Q6P589 184 aaPredicted RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 PLEKHM3Q6ZWE6 761 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 KIRREL3Q8IZU9 778 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 S100PBPQ96BU1 408 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 MARK4Q96L34 752 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 THUMPD3Q9BV44 507 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 NUF2Q9BZD4 464 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 QRSL1Q9H0R6 528 aaKnown RBP14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 KLHL9Q9P2J3 617 aa14.02□□□□□ -0.17
CHCHD3-204ENST00000457942 ROS1P08922 2347 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 FCMRO60667 390 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 CRLF1O75462 422 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 NTN1O95631 604 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 YES1P07947 543 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 LBPP18428 481 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 PGCP20142 388 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 PSMB1P20618 241 aaKnown RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 UQCRC2P22695 453 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 LOXP28300 417 aaPredicted RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 KHKP50053 298 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 NME5P56597 212 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 MERTKQ12866 999 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 CAPRIN1Q14444 709 aaKnown RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 TSC22D1Q15714 1073 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 ARHGAP11BQ3KRB8 267 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 BEND6Q5SZJ8 279 aaPredicted RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 TFAP2EQ6VUC0 442 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 EIF3MQ7L2H7 374 aaKnown RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF619Q8N2I2 560 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 SLC43A2Q8N370 569 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 OR8J2Q8NGG1 315 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF563Q8TA94 476 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 TMEM171Q8WVE6 324 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 XAGE5Q8WWM1 108 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 TMEM234Q8WY98 164 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 RAB8BQ92930 207 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 SORT1Q99523 831 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF350Q9GZX5 532 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 LAT2Q9GZY6 243 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 SSU72Q9NP77 194 aaKnown RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 SERINC1Q9NRX5 453 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 WDR45Q9Y484 360 aa14.01□□□□□ -0.17
CHCHD3-204ENST00000457942 FREM1Q5H8C1 2179 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 CENPVL1A0A0U1RR11 272 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 PRSS51A0A1B0GVH4 220 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 CLOCKO15516 846 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 KLF4O43474 513 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 UGT2B17O75795 530 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 TFPIP10646 304 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 ENPP1P22413 925 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 PTH2RP49190 550 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 RAC3P60763 192 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 RASGEF1BQ0VAM2 473 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 STX3Q13277 289 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 SKP2Q13309 424 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 ZNF141Q15928 474 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 FAM174BQ3ZCQ3 159 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 GPAT3Q53EU6 434 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 SPANXN4Q5MJ08 99 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 HHATQ5VTY9 493 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 HMBOX1Q6NT76 420 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 ANKRD42Q8N9B4 389 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 ST8SIA1Q92185 356 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 KISS1RQ969F8 398 aaPredicted RBP14□□□□□ -0.17
CHCHD3-204ENST00000457942 SLC35A5Q9BS91 424 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 HDHD5Q9BXW7 423 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 C20orf27Q9GZN8 174 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 OR10A4Q9H209 315 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 GP6Q9HCN6 339 aa14□□□□□ -0.17
CHCHD3-204ENST00000457942 MARCOQ9UEW3 520 aaPredicted RBP14□□□□□ -0.17
CHCHD3-204ENST00000457942 SPIN1Q9Y657 262 aaPredicted RBP14□□□□□ -0.17
CHCHD3-204ENST00000457942 PRR14LQ5THK1 2151 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 SONP18583 2426 aaKnown RBP13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 E9PBE3 544 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 KIAA0513O60268 411 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 H6PDO95479 791 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 PLAUP00749 431 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 ADAP00813 363 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 S100A3P33764 101 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 RYKP34925 604 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 SESN3P58005 492 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 DPY19L1Q2PZI1 675 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 SLC25A53Q5H9E4 307 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 PRSS57Q6UWY2 283 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 HMGN2P46Q86SG4 172 aa13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 AKAP1Q92667 903 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHCHD3-204ENST00000457942 TESCQ96BS2 214 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms