RNA–Protein interactions for RNA: ENST00000456128.5

TOM1-212, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 1,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-212ENST00000456128 PPP4R4Q6NUP7 873 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 SLC38A5Q8WUX1 472 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 TMEM234Q8WY98 164 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 OSTF1Q92882 214 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 ZNF559Q9BR84 538 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 RBM24Q9BX46 236 aaKnown RBP14.07□□□□□ -0.16
TOM1-212ENST00000456128 PRRG4Q9BZD6 226 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 TIGARQ9NQ88 270 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 ACER3Q9NUN7 267 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 SLC25A37Q9NYZ2 338 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 DSPPQ9NZW4 1301 aa14.07□□□□□ -0.16
TOM1-212ENST00000456128 CREBBPQ92793 2442 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 UQCRHLA0A096LP55 91 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 A0A1W2PP18 115 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 TMEM247A6NEH6 219 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 A8MXE2 369 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 BCHEP06276 602 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 NID1P14543 1247 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 IL7RP16871 459 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 CPA2P48052 419 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 SNTB1Q13884 538 aaKnown RBP14.06□□□□□ -0.16
TOM1-212ENST00000456128 TMEM176BQ3YBM2 270 aaPredicted RBP14.06□□□□□ -0.16
TOM1-212ENST00000456128 PAGE3Q5JUK9 113 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 C3orf33Q6P1S2 294 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 VWA1Q6PCB0 445 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 FAM214BQ7L5A3 538 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 MSRB3Q8IXL7 192 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 PEX5LQ8IYB4 626 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 WDR60Q8WVS4 1066 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 CNOT9Q92600 299 aaKnown RBP14.06□□□□□ -0.16
TOM1-212ENST00000456128 LURAP1Q96LR2 239 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 ZNF385DQ9H6B1 395 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 DNAJB12Q9NXW2 375 aaKnown RBP14.06□□□□□ -0.16
TOM1-212ENST00000456128 GALNT8Q9NY28 637 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 CRIM1Q9NZV1 1036 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 SLAMF8Q9P0V8 285 aa14.06□□□□□ -0.16
TOM1-212ENST00000456128 MED12LQ86YW9 2145 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 SMNDC1O75940 238 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOM1-212ENST00000456128 TROVE2P10155 538 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOM1-212ENST00000456128 BMP2P12643 396 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 CD1EP15812 388 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 PPIBP23284 216 aaKnown RBP14.05□□□□□ -0.16
TOM1-212ENST00000456128 SLC7A1P30825 629 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 RYKP34925 604 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 SIRPAP78324 504 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 MERTKQ12866 999 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 ZNF239Q16600 458 aaKnown RBP14.05□□□□□ -0.16
TOM1-212ENST00000456128 MRPL2Q5T653 305 aaKnown RBP14.05□□□□□ -0.16
TOM1-212ENST00000456128 METTL21CQ5VZV1 264 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 PLEKHM3Q6ZWE6 761 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 BTLAQ7Z6A9 289 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 ZNF563Q8TA94 476 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 CPNE4Q96A23 557 aaPredicted RBP14.05□□□□□ -0.16
TOM1-212ENST00000456128 TMEM19Q96HH6 336 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 GMPPAQ96IJ6 420 aaPredicted RBP14.05□□□□□ -0.16
TOM1-212ENST00000456128 A4GALTQ9NPC4 353 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 SERINC1Q9NRX5 453 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 VAPAQ9P0L0 249 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 GMEB1Q9Y692 573 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 CELSR1Q9NYQ6 3014 aa14.05□□□□□ -0.16
TOM1-212ENST00000456128 TRBV5-3A0A0A0MS03 114 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 A0A0G2JPF8 293 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 TUBAL3A6NHL2 446 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 HNRNPCL2B2RXH8 293 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 HNRNPCL3B7ZW38 293 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 HNRNPCL1O60812 293 aaKnown RBP14.04□□□□□ -0.16
TOM1-212ENST00000456128 ADAM11O75078 769 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 SS18L1O75177 396 aaPredicted RBP14.04□□□□□ -0.16
TOM1-212ENST00000456128 PLGP00747 810 aaPredicted RBP14.04□□□□□ -0.16
TOM1-212ENST00000456128 CGAP01215 116 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 NUDT7P0C024 238 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 PABPC4LP0CB38 370 aaKnown RBP14.04□□□□□ -0.16
TOM1-212ENST00000456128 HNRNPCL4P0DMR1 293 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 CD8BP10966 210 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 APOBEC1P41238 236 aaKnown RBP14.04□□□□□ -0.16
TOM1-212ENST00000456128 PCYT1AP49585 367 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 LIN52Q52LA3 116 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 PRAMEF8Q5VWM4 474 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 PRAMEF7Q5VXH5 474 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 GTF2IRD2BQ6EKJ0 949 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 GRINAQ7Z429 371 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 GTF2IRD2Q86UP8 949 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 ZZZ3Q8IYH5 903 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 OR52P1PQ8NH57 321 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 FAM222BQ8WU58 562 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 REXO5Q96IC2 774 aaKnown RBP14.04□□□□□ -0.16
TOM1-212ENST00000456128 CCDC106Q9BWC9 280 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 TMEM120AQ9BXJ8 343 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 SRXN1Q9BYN0 137 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 COQ10BQ9H8M1 238 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 GLRX2Q9NS18 164 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 FGFR1OP2Q9NVK5 253 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 EMC9Q9Y3B6 208 aa14.04□□□□□ -0.16
TOM1-212ENST00000456128 ANKRD17O75179 2603 aaKnown RBP14.03□□□□□ -0.16
TOM1-212ENST00000456128 CDHR4A6H8M9 788 aa14.03□□□□□ -0.16
TOM1-212ENST00000456128 CFAP73A6NFT4 308 aa14.03□□□□□ -0.16
TOM1-212ENST00000456128 FAAHO00519 579 aa14.03□□□□□ -0.16
TOM1-212ENST00000456128 ATP8B1O43520 1251 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms