RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 IDH2P48735 452 aaKnown RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 SESN3P58005 492 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 SMIM11AP58511 58 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 GPR85P60893 370 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 ST3GAL3Q11203 375 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 PIN1Q13526 163 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 DGCR6Q14129 220 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 TOMM34Q15785 309 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 SLC6A19Q695T7 634 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 OR5M10Q6IEU7 315 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 OR2T5Q6IEZ7 315 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 DEF8Q6ZN54 512 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 ATG4DQ86TL0 474 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 SLC22A16Q86VW1 577 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 GTPBP8Q8N3Z3 284 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 EXD3Q8N9H8 876 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 OR2T29Q8NH02 315 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 STMN2Q93045 179 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 SLC38A4Q969I6 547 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 C3orf49Q96BT1 292 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 GNRHR2Q96P88 292 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 KLHDC3Q9BQ90 382 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 PRSS27Q9BQR3 290 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 FUZQ9BT04 418 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 DCLRE1BQ9H816 532 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 ZDHHC11Q9H8X9 412 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 NMNAT1Q9HAN9 279 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 ACKR4Q9NPB9 350 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 KLHL1Q9NR64 748 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 MAN2C1Q9NTJ4 1040 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 RIMS3Q9UJD0 308 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 LHX6Q9UPM6 363 aa10.21□□□□□ -0.77
TRAF4-206ENST00000454852 FAM32AQ9Y421 112 aaKnown RBP10.21□□□□□ -0.77
TRAF4-206ENST00000454852 TPRP12270 2363 aaKnown RBP10.21□□□□□ -0.78
TRAF4-206ENST00000454852 BSNQ9UPA5 3926 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 A0A087WUJ7 227 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 HTR3EA5X5Y0 456 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 FAM47E-STBD1D6RA91 191 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 H0YHG0 523 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 J3KTA2 159 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ACOT7O00154 380 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 CLOCKO15516 846 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 CST1P01037 141 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 H1F0P07305 194 aaKnown RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 RFPL3SP0C7P2 107 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 PNMTP11086 282 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 GP1BBP13224 206 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ELK4P28324 431 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 RYKP34925 604 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 APOBEC1P41238 236 aaKnown RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 RBM34P42696 430 aaKnown RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 MAP1BP46821 2468 aaKnown RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ERFP50548 548 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 CCR4P51679 360 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ZNF41P51814 821 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 TAS2R41P59536 307 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 HOXC5Q00444 222 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 COLEC12Q5KU26 742 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ARSKQ6UWY0 536 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 GDF7Q7Z4P5 450 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 LILRA2Q8N149 483 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 FAM109AQ8N4B1 249 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 TMEM251Q8N6I4 163 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 OR4C15Q8NGM1 316 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ZNF563Q8TA94 476 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 POC1BQ8TC44 478 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 NRBF2Q96F24 287 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 SLC41A3Q96GZ6 507 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 PRR14Q9BWN1 585 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 SLC19A3Q9BZV2 496 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 SLC25A18Q9H1K4 315 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 NTN4Q9HB63 628 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 C6orf203Q9P0P8 240 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 STX18Q9P2W9 335 aaKnown RBP10.2□□□□□ -0.78
TRAF4-206ENST00000454852 LYVE1Q9Y5Y7 322 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 ZZEF1O43149 2961 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 USP24Q9UPU5 2620 aa10.2□□□□□ -0.78
TRAF4-206ENST00000454852 PCNX3Q9H6A9 2034 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 ARRDC5A6NEK1 342 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 CPSF4LA6NMK7 179 aaKnown RBP10.19□□□□□ -0.78
TRAF4-206ENST00000454852 ZNF208O43345 1280 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 FZD7O75084 574 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 TIPRLO75663 272 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 RASAL1O95294 804 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 NUDT14O95848 222 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 LDLRP01130 860 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 IGHG3P01860 377 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 TACR3P29371 465 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 CLK1P49759 484 aaKnown RBP10.19□□□□□ -0.78
TRAF4-206ENST00000454852 POLR2HP52434 150 aaKnown RBP10.19□□□□□ -0.78
TRAF4-206ENST00000454852 CDH12P55289 794 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 B3GALT5-AS1P59052 145 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 PPIAP62937 165 aaKnown RBP10.19□□□□□ -0.78
TRAF4-206ENST00000454852 TRAM2Q15035 370 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 ST3GAL2Q16842 350 aa10.19□□□□□ -0.78
TRAF4-206ENST00000454852 PLEKHN1Q494U1 663 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-206ENST00000454852 NHSL2Q5HYW2 709 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms