RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PFN3P60673 137 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 KCTD18Q6PI47 426 aaPredicted RBP7.24□□□□□ -1.25
RIF1-206ENST00000453091 GAREM2Q75VX8 874 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 FAM3CQ92520 227 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 NXPE3Q969Y0 559 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 ZNF442Q9H7R0 627 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 LMAN1LQ9HAT1 526 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 ATP13A2Q9NQ11 1180 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 VEGFDO43915 354 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 SELENOFO60613 162 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 ACTA2P62736 377 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 ACTG2P63267 376 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 RBM39Q14498 530 aaKnown RBP7.24□□□□□ -1.25
RIF1-206ENST00000453091 MELKQ14680 651 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 BAK1Q16611 211 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 ZNF674Q2M3X9 581 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 C9orf135Q5VTT2 229 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 Q6ZSR6 202 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 C12orf40Q86WS4 652 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 C12orf45Q8N5I9 185 aaPredicted RBP7.24□□□□□ -1.25
RIF1-206ENST00000453091 OR6T1Q8NGN1 323 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 OR9A4Q8NGU2 314 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 CD207Q9UJ71 328 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 RNF215Q9Y6U7 377 aa7.24□□□□□ -1.25
RIF1-206ENST00000453091 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ASPDHA6ND91 283 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 SLC16A7O60669 478 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 SCG5P05408 212 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 MYF5P13349 255 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 PCSK2P16519 638 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 TRIM23P36406 574 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CAPZA1P52907 286 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 LTBQ06643 244 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CDK10Q15131 360 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 LCTLQ6UWM7 567 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 KANSL1Q7Z3B3 1105 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 GHSRQ92847 366 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CDC6Q99741 560 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 TREX2Q9BQ50 279 aaPredicted RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 TMEM184CQ9NVA4 438 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CNOT2Q9NZN8 540 aaKnown RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 HCFC2Q9Y5Z7 792 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 SYT7O43581 403 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 OR8U9P0C7N5 309 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 TMEM225BP0DP42 221 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 RPS15AP62244 130 aaKnown RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 KCNJ10P78508 379 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 OR7A5Q15622 319 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 XKR7Q5GH72 579 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 FAM78AQ5JUQ0 283 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ACSM5Q6NUN0 579 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 UNC5DQ6UXZ4 953 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 TRIM46Q7Z4K8 759 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ZNF511Q8NB15 262 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 NR4A3Q92570 626 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 C1QTNF2Q9BXJ5 285 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 SEMA4CQ9C0C4 833 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 SFXN1Q9H9B4 322 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 MCCC2Q9HCC0 563 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 MRPS17Q9Y2R5 130 aaKnown RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 FAM230AA0A1W2PPH8 454 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 A8MVJ9 347 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 H7C417 338 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 IL33O95760 270 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ZNF28P17035 718 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 FBLP22087 321 aaKnown RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 PTRH1Q86Y79 214 aaKnown RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 OR5D18Q8NGL1 313 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 TM4SF18Q96CE8 201 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 MS4A4EQ96PG1 132 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ACTR10Q9NZ32 417 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 LDOC1O95751 146 aaPredicted RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 ELK1P19419 428 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 OR1D4P47884 311 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 RAB5BP61020 215 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CDK3Q00526 305 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 POU4F2Q12837 409 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 FAPQ12884 760 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CRMP1Q14194 572 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 INSL4Q14641 139 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 RAB30Q15771 203 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 RAET1LQ5VY80 246 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 RIMKLAQ8IXN7 391 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CBARPQ8N350 705 aaPredicted RBP7.23□□□□□ -1.25
RIF1-206ENST00000453091 OR2A12Q8NGT7 310 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ELP5Q8TE02 316 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 CHST2Q9Y4C5 530 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 V9GY05 133 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 RGPD1P0DJD0 1748 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ATP6V1G2-DDX39BF2Z307 99 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 NME2P22392 152 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 PSPHP78330 225 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 DGCR2P98153 550 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 FGL1Q08830 312 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 TRAM1Q15629 374 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 SFXN4Q6P4A7 337 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 ESX1Q8N693 406 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 C2CD4CQ8TF44 421 aa7.23□□□□□ -1.25
RIF1-206ENST00000453091 PKMYT1Q99640 499 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms