RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 TCEA1P23193 301 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 RYKP34925 604 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 ACAA2P42765 397 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 HTR3AP46098 478 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 ZNF136P52737 540 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 CASP6P55212 293 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 SESN3P58005 492 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 SELENOWP63302 87 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 TOMM34Q15785 309 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 BCL2A1Q16548 175 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 COMTD1Q86VU5 262 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 EID3Q8N140 333 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 POC1BQ8TC44 478 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 PRDM14Q9GZV8 571 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 GORASP2Q9H8Y8 452 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 PACSIN3Q9UKS6 424 aa13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-211ENST00000452495 FIGNL2A6NMB9 653 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 NPIPA2E9PIF3 369 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 NPIPA3F8WFD2 350 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 H3BML4 177 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 FRS3O43559 492 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 SERPINA1P01009 418 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 TPOP07202 933 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 PEPDP12955 493 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 PRG2P13727 222 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 CPN1P15169 458 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 NCK1P16333 377 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 ZNF708P17019 499 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 ME2P23368 584 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 APOBEC1P41238 236 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 SLC1A3P43003 542 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 LHX2P50458 406 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 MRPL49Q13405 166 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 IGFBP7Q16270 282 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 MTX3Q5HYI7 312 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 DCST1Q5T197 706 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 WBP2NLQ6ICG8 309 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 C3orf33Q6P1S2 294 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 CCDC121Q6ZUS5 278 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 PLEKHM3Q6ZWE6 761 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 CD163Q86VB7 1156 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 LSMEM1Q8N8F7 131 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 SLC25A43Q8WUT9 341 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 ASB9Q96DX5 294 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 TIMP4Q99727 224 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 ZNF559Q9BR84 538 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 LRMDAQ9H2I8 198 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 ACAD8Q9UKU7 415 aa13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 SPIN1Q9Y657 262 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-211ENST00000452495 GJE1A6NN92 205 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 SHISA8B8ZZ34 492 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 M0R3H8 397 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 WDR1O75083 606 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 PDE5AO76074 875 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 ZNF682O95780 498 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 STSP08842 583 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 GABRA1P14867 456 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 GNLYP22749 145 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 PTGER4P35408 488 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 POLR2HP52434 150 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 MAP2K6P52564 334 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 CLDN18P56856 261 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 RAC1P63000 192 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 MERTKQ12866 999 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.33e-11■■■■□ 25
TRAPPC12-211ENST00000452495 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 OR5M1Q8NGP8 315 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 GEMIN6Q8WXD5 167 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 POP5Q969H6 163 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 TPD52L3Q96J77 140 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 NSMCE2Q96MF7 247 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 NPAS1Q99742 590 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 TRIM2Q9C040 744 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 POLR2J2Q9GZM3 115 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 PCDHAC1Q9H158 963 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 POLR2J3Q9H1A7 115 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 DCAF13Q9NV06 445 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 ACTR3BQ9P1U1 418 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 ZNF337Q9Y3M9 751 aa13.16□□□□□ -0.3
TRAPPC12-211ENST00000452495 HIVEP3Q5T1R4 2406 aa13.15□□□□□ -0.3
TRAPPC12-211ENST00000452495 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
TRAPPC12-211ENST00000452495 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
TRAPPC12-211ENST00000452495 H0Y3Z8 333 aa13.15□□□□□ -0.3
TRAPPC12-211ENST00000452495 STAMBPO95630 424 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms