RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TRPC5OSA6NMA1 111 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 ETV2O00321 342 aaPredicted RBP11.49□□□□□ -0.57
CHD3-206ENST00000452447 HDAC3O15379 428 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 KIAA0513O60268 411 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 SMPD2O60906 423 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 NTN1O95631 604 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 KITP10721 976 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 NID1P14543 1247 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 FOSL1P15407 271 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 HOXC12P31275 282 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 UFM1P61960 85 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 NKX6-1P78426 367 aaPredicted RBP11.49□□□□□ -0.57
CHD3-206ENST00000452447 ACKR1Q16570 336 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 GPAT3Q53EU6 434 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 TYW3Q6IPR3 259 aaKnown RBP11.49□□□□□ -0.57
CHD3-206ENST00000452447 SPATA19Q7Z5L4 167 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 P3H2Q8IVL5 708 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 ZNF563Q8TA94 476 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 OIT3Q8WWZ8 545 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 ZNF524Q96C55 264 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 HS3ST6Q96QI5 342 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 OR5B2Q96R09 309 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 PANX1Q96RD7 426 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 ZBTB18Q99592 522 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 CCL19Q99731 98 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 HDHD5Q9BXW7 423 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 ACTR6Q9GZN1 396 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 NKIRAS1Q9NYS0 192 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 KLHL9Q9P2J3 617 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 BTNL2Q9UIR0 455 aa11.49□□□□□ -0.57
CHD3-206ENST00000452447 TLN2Q9Y4G6 2542 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 GOLGA8QA0A0J9YX86 632 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 CENPVL1A0A0U1RR11 272 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 GOLGA8OA6NCC3 632 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 GOLGA8NF8WBI6 632 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 SDHDO14521 159 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 ARHGEF9O43307 516 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 PGRP06401 933 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 THBDP07204 575 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 YES1P07947 543 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 GUSBP08236 651 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 ALDOCP09972 364 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 PSMB1P20618 241 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 ENPP1P22413 925 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 EPHA3P29320 983 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 ANXA11P50995 505 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 NR1H2P55055 460 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 WDR4P57081 412 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 SESN3P58005 492 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 LRRC74AQ0VAA2 488 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 MERTKQ12866 999 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 MAPK14Q16539 360 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 SHEQ5VZ18 495 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 C20orf204Q6ZNR8 217 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 ZNF621Q6ZSS3 439 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 NUFIP2Q7Z417 695 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 RNF130Q86XS8 419 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 WFDC8Q8IUA0 241 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 MARK4Q96L34 752 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 TEX37Q96LM6 180 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 CCDC115Q96NT0 180 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 OR52E6Q96RD3 313 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 PIP5K1AQ99755 562 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 SAP130Q9H0E3 1048 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 QRSL1Q9H0R6 528 aaKnown RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 OR10A4Q9H209 315 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 WDR55Q9H6Y2 383 aaPredicted RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 AIG1Q9NVV5 245 aa11.48□□□□□ -0.57
CHD3-206ENST00000452447 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
CHD3-206ENST00000452447 IGHV3-15A0A0B4J1V0 119 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 CCDC154A6NI56 674 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 C9JVG2 144 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 SLCO1B7G3V0H7 640 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 DNAJA2O60884 412 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 SNNO75324 88 aaPredicted RBP11.47□□□□□ -0.57
CHD3-206ENST00000452447 IL32P24001 234 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 RYKP34925 604 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 PGM1P36871 562 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 SLC18A1P54219 525 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 MAGOHP61326 146 aaKnown RBP11.47□□□□□ -0.57
CHD3-206ENST00000452447 RASGEF1BQ0VAM2 473 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 ALKBH2Q6NS38 261 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 TFAP2EQ6VUC0 442 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 FRRS1Q6ZNA5 592 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 CXorf67Q86X51 503 aaPredicted RBP11.47□□□□□ -0.57
CHD3-206ENST00000452447 GLB1L3Q8NCI6 653 aaPredicted RBP11.47□□□□□ -0.57
CHD3-206ENST00000452447 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 SLC25A43Q8WUT9 341 aaPredicted RBP11.47□□□□□ -0.57
CHD3-206ENST00000452447 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.47□□□□□ -0.57
CHD3-206ENST00000452447 ACER3Q9NUN7 267 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 LIPT1Q9Y234 373 aa11.47□□□□□ -0.57
CHD3-206ENST00000452447 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.57
CHD3-206ENST00000452447 SULT2B1O00204 365 aa11.46□□□□□ -0.57
CHD3-206ENST00000452447 HMGN4O00479 90 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms