RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KCNJ10P78508 379 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 NFYCQ13952 458 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 PON3Q15166 354 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 TOMM34Q15785 309 aaPredicted RBP13.1□□□□□ -0.31
USP39-206ENST00000448971 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 GCNT6Q5T4J0 391 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 ADGRE4PQ86SQ3 457 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 GGNQ86UU5 652 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 TMEM200AQ86VY9 491 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 MSRB3Q8IXL7 192 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 METTL25Q8N6Q8 603 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 ZNF563Q8TA94 476 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 GPR119Q8TDV5 335 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 WNT2BQ93097 391 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 ZNF845Q96IR2 970 aaPredicted RBP13.1□□□□□ -0.31
USP39-206ENST00000448971 MRGPRX4Q96LA9 322 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 ZFP3Q96NJ6 502 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 THUMPD3Q9BV44 507 aaKnown RBP13.1□□□□□ -0.31
USP39-206ENST00000448971 SLC52A3Q9NQ40 469 aa13.1□□□□□ -0.31
USP39-206ENST00000448971 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 TNFSF11O14788 317 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 BCAS1O75363 584 aaPredicted RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 FCGR2AP12318 317 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 CTSSP25774 331 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 PSMA4P25789 261 aaKnown RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 ADH6P28332 368 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 AGFG1P52594 562 aaKnown RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 DLX5P56178 289 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 RAC1P63000 192 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 SELENBP1Q13228 472 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 MAPRE2Q15555 327 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 PDSS1Q5T2R2 415 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 MRPL2Q5T653 305 aaKnown RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 C3orf33Q6P1S2 294 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 POMZP3Q6PJE2 187 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 LIX1LQ8IVB5 337 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 RELL2Q8NC24 303 aaPredicted RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 FAM71CQ8NEG0 241 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 ATP6V1C2Q8NEY4 427 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 BBS10Q8TAM1 723 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 SLC38A5Q8WUX1 472 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 TMEM234Q8WY98 164 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 FIG4Q92562 907 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 MAL2Q969L2 176 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 INTS12Q96CB8 462 aaKnown RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 ZG16BQ96DA0 208 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 KLHL15Q96M94 604 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 PRRG4Q9BZD6 226 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 A4GALTQ9NPC4 353 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 EXOSC3Q9NQT5 275 aaKnown RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 CCM2LQ9NUG4 571 aaPredicted RBP13.09□□□□□ -0.31
USP39-206ENST00000448971 DSPPQ9NZW4 1301 aa13.09□□□□□ -0.31
USP39-206ENST00000448971 TRBV5-3A0A0A0MS03 114 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 GJE1A6NN92 205 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 CTAG2O75638 210 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 SYNGR4O95473 234 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 TGM6O95932 706 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 TFPTP0C1Z6 253 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 NID1P14543 1247 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 UQCRBP14927 111 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 IL11P20809 199 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 SLC7A1P30825 629 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 OPRM1P35372 400 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 SLC6A8P48029 635 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 ASCL1P50553 236 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 GUCA2AQ02747 115 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 MAPK11Q15759 364 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 MMEL1Q495T6 779 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 HBMQ6B0K9 141 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 OR2A2Q6IF42 318 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 ZNF836Q6ZNA1 936 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 ESPNLQ6ZVH7 1005 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 VRK2Q86Y07 508 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 LILRA2Q8N149 483 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 OR52P1PQ8NH57 321 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 OR10D3Q8NH80 312 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 OR2V1Q8NHB1 315 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 FNDC9Q8TBE3 224 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 TSPEARQ8WU66 669 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 C10orf82Q8WW14 230 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 ST8SIA1Q92185 356 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 PMM1Q92871 262 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 NINJ1Q92982 152 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 UCN2Q96RP3 112 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 CPPED1Q9BRF8 314 aaPredicted RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 LIME1Q9H400 295 aa13.08□□□□□ -0.32
USP39-206ENST00000448971 MTHFD2LQ9H903 347 aaPredicted RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 PAQR5Q9NXK6 330 aaPredicted RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 DNAJB12Q9NXW2 375 aaKnown RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 MCTS1Q9ULC4 181 aaKnown RBP13.08□□□□□ -0.32
USP39-206ENST00000448971 ZNF443Q9Y2A4 671 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms