RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 FNDC1Q4ZHG4 1894 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 NOTCH3Q9UM47 2321 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GFYI3L273 518 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TAF4O00268 1085 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GAPDHSO14556 408 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SULT1B1O43704 296 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAD51DO75771 328 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 MYL12AP19105 171 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 S100A1P23297 94 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 FKBP2P26885 142 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 THBS2P35442 1172 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 HLCSP50747 726 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GLO1Q04760 184 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC36A2Q495M3 483 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 WDR93Q6P2C0 686 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC22A18ASQ8N1D0 253 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 CACTIN-AS1Q8N1I8 211 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TMBIM4Q9HC24 238 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 FOXJ2Q9P0K8 574 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 MKLN1Q9UL63 735 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TMEM5Q9Y2B1 443 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1W2PPM1 405 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 AIFM1O95831 613 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PIGFQ07326 219 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF658BQ4V348 819 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPPL2CQ8IUH8 684 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PROKR2Q8NFJ6 384 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 COX14Q96I36 57 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 VN1R1Q9GZP7 353 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 CD248Q9HCU0 757 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 LOC102725191A0A1B0GVB3 256 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 BHMG1C9JSJ3 638 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 K7ENP7 123 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 MFN2O95140 757 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GGT5P36269 586 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TSTQ16762 297 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 IFI44LQ53G44 452 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GPR157Q5UAW9 335 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 INO80CQ6PI98 192 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF534Q76KX8 674 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 BHLHA9Q7RTU4 235 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 GLCCI1Q86VQ1 547 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLCZ1Q86YW0 608 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TTC9Q92623 222 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 CCDC28BQ9BUN5 200 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 ULBP2Q9BZM5 246 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 NT5DC2Q9H857 520 aa5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 TESQ9UGI8 421 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 SAMHD1Q9Y3Z3 626 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-209ENST00000448940 MROH6A6NGR9 719 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLCA1A8K7I4 914 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 WDR1O75083 606 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 NME6O75414 186 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 APOA1P02647 267 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 S100A6P06703 90 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF16P17020 682 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 MDH1P40925 334 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ETV5P41161 510 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 IDH3GP51553 393 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 CDC42P60953 191 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 LCN1P1Q5VSP4 162 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 FBXW8Q8N3Y1 598 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR52P1PQ8NH57 321 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 LINC01560Q8TB33 94 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 WDR55Q9H6Y2 383 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 MTHFD2LQ9H903 347 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM118AQ9NWS6 357 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 B3GALT5Q9Y2C3 310 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 AP4S1Q9Y587 144 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 NRP2O60462 931 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 FMO6PO60774 539 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 RCBTB2O95199 551 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 GPANK1O95872 356 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 LDLRP01130 860 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 LINC00271P0C7V0 271 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 CPEP16870 476 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 C4BPBP20851 252 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 CHMP24386 653 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 GPR6P46095 362 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 XIAPP98170 497 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 EMX2Q04743 252 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 REEP3Q6NUK4 255 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 FRRS1Q6ZNA5 592 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADGRF3Q8IZF5 1079 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC43A2Q8N370 569 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF740Q8NDX6 193 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR2A1Q8NGT9 310 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 NR4A3Q92570 626 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPTSSAQ969W0 71 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 COPS4Q9BT78 406 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 MECRQ9BV79 373 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 GHITMQ9H3K2 345 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 CRNNQ9UBG3 495 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ABCA2Q9BZC7 2435 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 TP53BP1Q12888 1972 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 NLRC5Q86WI3 1866 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZCWPW2A0A1B0GU75 182 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF821O75541 412 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 CD53P19397 219 aa5.19□□□□□ -1.58
CDC42BPA-209ENST00000448940 PIGAP37287 484 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms