RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 MERTKQ12866 999 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 SELENBP1Q13228 472 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 SLC25A53Q5H9E4 307 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 HIST2H2BCQ6DN03 193 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 ERICH5Q6P6B1 374 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 PTOV1Q86YD1 416 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 GRAMD2AQ8IUY3 354 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 ZZZ3Q8IYH5 903 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 ANKS4BQ8N8V4 417 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 BHLHE22Q8NFJ8 381 aaPredicted RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 CA5BP1Q8WTZ4 195 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 NPAS1Q99742 590 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 HOPXQ9BPY8 73 aaPredicted RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 TMEM185BQ9H7F4 350 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 ACER3Q9NUN7 267 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 RLIMQ9NVW2 624 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 NAV2Q8IVL1 2488 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 MYO7BQ6PIF6 2116 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 A1L4Q6 167 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 HSPB2A8KAH6 182 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PSMA4P25789 261 aaKnown RBP12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 CHRNB4P30926 498 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PCGF2P35227 344 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 SFTPDP35247 375 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 TIMP3P35625 211 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 HTR3AP46098 478 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 EIF1AXP47813 144 aaKnown RBP12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 SUCLG1P53597 346 aaKnown RBP12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 CLDN15P56746 228 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 EPS8Q12929 822 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 HSPB2Q16082 182 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 VMACQ2NL98 169 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PPP4R4Q6NUP7 873 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 C3orf33Q6P1S2 294 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 POMZP3Q6PJE2 187 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 HACD2Q6Y1H2 254 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 ESPNLQ6ZVH7 1005 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 GRINAQ7Z429 371 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PATL1Q86TB9 770 aaKnown RBP12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 ARMC8Q8IUR7 673 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 CCDC71Q8IV32 467 aaPredicted RBP12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 CLIP4Q8N3C7 705 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 SLC26A7Q8TE54 656 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 WNT2BQ93097 391 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 KLHL15Q96M94 604 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 TM9SF2Q99805 663 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PINK1Q9BXM7 581 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PRRG4Q9BZD6 226 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 KLHL28Q9NXS3 571 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 PRDM4Q9UKN5 801 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 RNF6Q9Y252 685 aa12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
GTF3C3-206ENST00000448539 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 SLC22A20A6NK97 555 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 H0YC42 278 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 ETV2O00321 342 aaPredicted RBP12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 FAAHO00519 579 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 NDUFAB1O14561 156 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 AP3D1O14617 1153 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 TNFSF11O14788 317 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 CLDN14O95500 239 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 IL11P20809 199 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 SLC7A1P30825 629 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 APOBEC1P41238 236 aaKnown RBP12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 TPD52P55327 224 aaPredicted RBP12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 TMEM176BQ3YBM2 270 aaPredicted RBP12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 HBMQ6B0K9 141 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 DHRS4L2Q6PKH6 230 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 PLEKHM3Q6ZWE6 761 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 GGNQ86UU5 652 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 CADM2Q8N3J6 435 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 OR2V1Q8NHB1 315 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 UCN2Q96RP3 112 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 TIGARQ9NQ88 270 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 PLEKHB1Q9UF11 243 aaPredicted RBP12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 Q9UFV3 132 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
GTF3C3-206ENST00000448539 MBD3L4A6NDZ8 208 aaPredicted RBP12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 MBD3L3A6NE82 208 aaPredicted RBP12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 MBD3L5A6NJ08 208 aaPredicted RBP12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 FAM220BPB1ANY3 271 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 KDM4EB2RXH2 506 aaPredicted RBP12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 M0QX08 132 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 SYNGR4O95473 234 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 NTN1O95631 604 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 TFPIP10646 304 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 FCGR2AP12318 317 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 FKBP2P26885 142 aaKnown RBP12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 CEACAM8P31997 349 aaPredicted RBP12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 SLC1A3P43003 542 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 CPA2P48052 419 aa12.61□□□□□ -0.39
GTF3C3-206ENST00000448539 GZMMP51124 257 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms