RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NME2P1O60361 137 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 THY1P04216 161 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 GP1BBP13224 206 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 FPR1P21462 350 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 NME2P22392 152 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 SLC1A3P43003 542 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 ZNF41P51814 821 aaPredicted RBP17.76■□□□□ 0.43
SGCE-207ENST00000447873 LRRC36Q1X8D7 754 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 ZNF766Q5HY98 468 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 DCST1Q5T197 706 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 LPCAT4Q643R3 524 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 SHQ1Q6PI26 577 aaKnown RBP17.76■□□□□ 0.43
SGCE-207ENST00000447873 TMEM179BQ7Z7N9 219 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 ZDHHC13Q8IUH4 622 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 SULF2Q8IWU5 870 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 SVOPLQ8N434 492 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 ZADH2Q8N4Q0 377 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 EXTL1Q92935 676 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 GNRHR2Q96P88 292 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 CIB1Q99828 191 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 ANKRD19PQ9H560 264 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 TAS2R10Q9NYW0 307 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 BOKQ9UMX3 212 aaPredicted RBP17.76■□□□□ 0.43
SGCE-207ENST00000447873 FAM47E-STBD1D6RA91 191 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 KLRC4-KLRK1H3BQV0 150 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 CHP2O43745 196 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 CBR3O75828 277 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 ITGB2P05107 769 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 MST1P26927 711 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 PEX2P28328 305 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 LIMS1P48059 325 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 PTDSS1P48651 473 aaKnown RBP17.75■□□□□ 0.43
SGCE-207ENST00000447873 SWT1Q5T5J6 900 aaKnown RBP17.75■□□□□ 0.43
SGCE-207ENST00000447873 ARSKQ6UWY0 536 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 IGFL3Q6UXB1 125 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 GALNTL5Q7Z4T8 443 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 HIPK1Q86Z02 1210 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 TMEM178AQ8NBL3 297 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 OR2M7Q8NG81 312 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 OR4C15Q8NGM1 316 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 SLC7A13Q8TCU3 470 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 SLC38A4Q969I6 547 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 C3orf49Q96BT1 292 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 C1GALT1C1Q96EU7 318 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 NRBF2Q96F24 287 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 C9orf16Q9BUW7 83 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 TUBA8Q9NY65 449 aaPredicted RBP17.75■□□□□ 0.43
SGCE-207ENST00000447873 VDAC3Q9Y277 283 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 CSAG2Q9Y5P2 127 aa17.75■□□□□ 0.43
SGCE-207ENST00000447873 TRBV4-1A0A0J9YWV2 114 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 PEX1O43933 1283 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 LAPTM4AQ15012 233 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 STK32CQ86UX6 486 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 NKAIN4Q8IVV8 208 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 KDF1Q8NAX2 398 aaPredicted RBP17.74■□□□□ 0.43
SGCE-207ENST00000447873 NRG4Q8WWG1 115 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 ST8SIA1Q92185 356 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 ZNF524Q96C55 264 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 SCMH1Q96GD3 660 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 ZFP64Q9NPA5 681 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 MED17Q9NVC6 651 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 PDP1Q9P0J1 537 aaPredicted RBP17.74■□□□□ 0.43
SGCE-207ENST00000447873 TRAV17A0A0B4J275 112 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 PINLYPA6NC86 204 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 PDLIM1O00151 329 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 CCNB2O95067 398 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 LYPD3O95274 346 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 TACR3P29371 465 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 MICAQ29983 383 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 OTUD3Q5T2D3 398 aaPredicted RBP17.74■□□□□ 0.43
SGCE-207ENST00000447873 OGFRL1Q5TC84 451 aaPredicted RBP17.74■□□□□ 0.43
SGCE-207ENST00000447873 PODNL1Q6PEZ8 512 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 ZBTB49Q6ZSB9 765 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 RRM2BQ7LG56 351 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 GRINAQ7Z429 371 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 EPHX4Q8IUS5 362 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 HS3ST5Q8IZT8 346 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 MPP4Q96JB8 637 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 PRSS27Q9BQR3 290 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 ADAM19Q9H013 955 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 PCDHGB7Q9Y5F8 929 aa17.74■□□□□ 0.43
SGCE-207ENST00000447873 MAGED1Q9Y5V3 778 aaPredicted RBP17.74■□□□□ 0.43
SGCE-207ENST00000447873 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 LRRC3CA6NJW4 275 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 ELOA3DA6NLF2 546 aaPredicted RBP17.73■□□□□ 0.43
SGCE-207ENST00000447873 PNMTP11086 282 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 PRKCAP17252 672 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 DPP4P27487 766 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 HTR3AP46098 478 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 DSCR4P56555 118 aaPredicted RBP17.73■□□□□ 0.43
SGCE-207ENST00000447873 FOXO1Q12778 655 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 SEC23BQ15437 767 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 PLPPR5Q32ZL2 321 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 ELOA3BQ3SY89 546 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 ZNF730Q6ZMV8 503 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 ELOA3Q8NG57 546 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 GIPC3Q8TF64 312 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 ACOT11Q8WXI4 607 aaPredicted RBP17.73■□□□□ 0.43
SGCE-207ENST00000447873 BARD1Q99728 777 aaKnown RBP17.73■□□□□ 0.43
SGCE-207ENST00000447873 VCX3BQ9H321 246 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms