RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 A0A1B0GWA3 101 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 TRAPPC13A5PLN9 417 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.21
CCNE1-203ENST00000444983 CLOCKO15516 846 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 CST1P01037 141 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 THRBP10828 461 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 FCGR1AP12314 374 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 UQCRBP14927 111 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 LIMS1P48059 325 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 COPZ1P61923 177 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 GANABQ14697 944 aaKnown RBP13.71□□□□□ -0.21
CCNE1-203ENST00000444983 ATP6AP1Q15904 470 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 PLEKHN1Q494U1 663 aaPredicted RBP13.71□□□□□ -0.21
CCNE1-203ENST00000444983 RNFT1Q5M7Z0 435 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 SWT1Q5T5J6 900 aaKnown RBP13.71□□□□□ -0.21
CCNE1-203ENST00000444983 ULK3Q6PHR2 472 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 GDF7Q7Z4P5 450 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 OR4K17Q8NGC6 315 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 LRTOMTQ8WZ04 291 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 SLC38A4Q969I6 547 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 PRSS27Q9BQR3 290 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 ARHGAP9Q9BRR9 750 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 FUZQ9BT04 418 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF426Q9BUY5 554 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 DCLRE1BQ9H816 532 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 TMEM27Q9HBJ8 222 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 CTPS2Q9NRF8 586 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
CCNE1-203ENST00000444983 FAM32AQ9Y421 112 aaKnown RBP13.71□□□□□ -0.21
CCNE1-203ENST00000444983 EPG5Q9HCE0 2579 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 A0A087WZY1 265 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 A0A1W2PRQ8 180 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 C7orf72A4D263 438 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 NUDT14O95848 222 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 HPNP05981 417 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 FASP25445 335 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 DPP4P27487 766 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 SRD5A2P31213 254 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 CDH12P55289 794 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 TAS2R41P59536 307 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 DGCR6Q14129 220 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 GLYR1Q49A26 553 aaPredicted RBP13.7□□□□□ -0.22
CCNE1-203ENST00000444983 SLC6A19Q695T7 634 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 CYP4Z1Q86W10 505 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 POC1BQ8TC44 478 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 DNAJA4Q8WW22 397 aaPredicted RBP13.7□□□□□ -0.22
CCNE1-203ENST00000444983 PKP2Q99959 881 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 C12orf10Q9HB07 376 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 ZNF71Q9NQZ8 489 aaPredicted RBP13.7□□□□□ -0.22
CCNE1-203ENST00000444983 VNN3Q9NY84 501 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 RHCGQ9UBD6 479 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 LHX6Q9UPM6 363 aa13.7□□□□□ -0.22
CCNE1-203ENST00000444983 ADAMDEC1O15204 470 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 CHP2O43745 196 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 CDC40O60508 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ADH6P28332 368 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 RRM2P31350 389 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 RFC3P40938 356 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 FOXK1P85037 733 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ST3GAL3Q11203 375 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 RCN1Q15293 331 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ALG10BQ5I7T1 473 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 WDR88Q6ZMY6 472 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 PLEKHM3Q6ZWE6 761 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ATG4DQ86TL0 474 aaPredicted RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 CADM2Q8N3J6 435 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 TMEM251Q8N6I4 163 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ZNF563Q8TA94 476 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 PNPLA2Q96AD5 504 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ZBTB8AQ96BR9 441 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 SLC41A3Q96GZ6 507 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 MRGPRX4Q96LA9 322 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 TAAR6Q96RI8 345 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ANKRD19PQ9H560 264 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 QPCTLQ9NXS2 382 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 STX18Q9P2W9 335 aaKnown RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 OSGIN1Q9UJX0 560 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 VDAC3Q9Y277 283 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 TESMINQ9Y4I5 508 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 LYVE1Q9Y5Y7 322 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 A0A087WUJ7 227 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 EFNA2O43921 213 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 DEAF1O75398 565 aaPredicted RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 H1F0P07305 194 aaKnown RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 TACR3P29371 465 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ZNF41P51814 821 aaPredicted RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 B3GALT5-AS1P59052 145 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 NADK2Q4G0N4 442 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 COLEC12Q5KU26 742 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 ADGRG3Q86Y34 549 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 PQLC1Q8N2U9 271 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 GTPBP8Q8N3Z3 284 aaPredicted RBP13.69□□□□□ -0.22
CCNE1-203ENST00000444983 Q8NA96 180 aa13.69□□□□□ -0.22
CCNE1-203ENST00000444983 OR4C15Q8NGM1 316 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms