RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 GDF7Q7Z4P5 450 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 WDR60Q8WVS4 1066 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 ST8SIA1Q92185 356 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 ZNF317Q96PQ6 595 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-205ENST00000444415 A4GALTQ9NPC4 353 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 TRIM33Q9UPN9 1127 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 CGAP01215 116 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 ME2P23368 584 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 CRISP3P54108 245 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 EEF1A1P68104 462 aaKnown RBP19.55■□□□□ 0.72
TRAF4-205ENST00000444415 SELENBP1Q13228 472 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 METTL21CQ5VZV1 264 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 HBMQ6B0K9 141 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 ZNF836Q6ZNA1 936 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 PLEKHM3Q6ZWE6 761 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 BTLAQ7Z6A9 289 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 LUZP2Q86TE4 346 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 PMM1Q92871 262 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 C14orf79Q96F83 325 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 CPPED1Q9BRF8 314 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-205ENST00000444415 CCDC106Q9BWC9 280 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 RABEP2Q9H5N1 569 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 ACER3Q9NUN7 267 aa19.55■□□□□ 0.72
TRAF4-205ENST00000444415 CRHP06850 196 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 DBIP07108 87 aaKnown RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 VIMP08670 466 aaKnown RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 PGCP20142 388 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 UQCRC1P31930 480 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 RYKP34925 604 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 MDH1P40925 334 aaKnown RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 SELPLGQ14242 412 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 SGCBQ16585 318 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 ZNF239Q16600 458 aaKnown RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 TMEM176BQ3YBM2 270 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 OR2A2Q6IF42 318 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 CMIPQ8IY22 773 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 DPP10Q8N608 796 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 ATP6V1C2Q8NEY4 427 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 OSTF1Q92882 214 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 STOML1Q9UBI4 398 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 SPG11Q96JI7 2443 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 A0A1W2PNR3 127 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 CDHR4A6H8M9 788 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 A8MXE2 369 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 FBP2O00757 339 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 TROVE2P10155 538 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 ARAFP10398 606 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 IL7RP16871 459 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 GPX2P18283 190 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 KLK2P20151 261 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 SIRPAP78324 504 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 ADRM1Q16186 407 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 RUNDC3AQ59EK9 446 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 OR52P1PQ8NH57 321 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 BCL2L10Q9HD36 194 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 CTPS2Q9NRF8 586 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 GALNT8Q9NY28 637 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 LEF1Q9UJU2 399 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 PACSIN3Q9UKS6 424 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 CLEC4AQ9UMR7 237 aa19.54■□□□□ 0.72
TRAF4-205ENST00000444415 ZNF443Q9Y2A4 671 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-205ENST00000444415 ABCA4P78363 2273 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 OTOGQ6ZRI0 2925 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 ARFIP2P53365 341 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 MERTKQ12866 999 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 EPS8Q12929 822 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 C3orf33Q6P1S2 294 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 DHDDSQ86SQ9 333 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 COMTD1Q86VU5 262 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 CLIP4Q8N3C7 705 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 CNEP1R1Q8N9A8 125 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 C10orf82Q8WW14 230 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 ROBO4Q8WZ75 1007 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 SAR1AQ9NR31 198 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 THUMPD1Q9NXG2 353 aaKnown RBP19.53■□□□□ 0.72
TRAF4-205ENST00000444415 PAQR5Q9NXK6 330 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-205ENST00000444415 CALML5Q9NZT1 146 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 NDUFAF1Q9Y375 327 aa19.53■□□□□ 0.72
TRAF4-205ENST00000444415 AKAP6Q13023 2319 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 VPS13CQ709C8 3753 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 A0A0G2JPF8 293 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 HNRNPCL2B2RXH8 293 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 HNRNPCL3B7ZW38 293 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 HNRNPCL1O60812 293 aaKnown RBP19.52■□□□□ 0.72
TRAF4-205ENST00000444415 GKN3PP0CG01 181 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 HNRNPCL4P0DMR1 293 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 ACAA2P42765 397 aaKnown RBP19.52■□□□□ 0.72
TRAF4-205ENST00000444415 IDH2P48735 452 aaKnown RBP19.52■□□□□ 0.72
TRAF4-205ENST00000444415 CARD18P57730 90 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 RNF220Q5VTB9 566 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 PPP4R4Q6NUP7 873 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 ZNF474Q6S9Z5 364 aaPredicted RBP19.52■□□□□ 0.72
TRAF4-205ENST00000444415 PEX5LQ8IYB4 626 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 RNF128Q8TEB7 428 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 TSPEARQ8WU66 669 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 RBM24Q9BX46 236 aaKnown RBP19.52■□□□□ 0.72
TRAF4-205ENST00000444415 OPN3Q9H1Y3 402 aaPredicted RBP19.52■□□□□ 0.72
TRAF4-205ENST00000444415 PIGMQ9H3S5 423 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 RAD21L1Q9H4I0 556 aa19.52■□□□□ 0.72
TRAF4-205ENST00000444415 CRIM1Q9NZV1 1036 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms