RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 RAB24Q969Q5 203 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 WDR83Q9BRX9 315 aaKnown RBP4.84□□□□□ -1.64
SCN11A-202ENST00000444237 DPH7Q9BTV6 452 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 EFCAB11Q9BUY7 163 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 KATNBL1Q9H079 304 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 CHRDQ9H2X0 955 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 CLMPQ9H6B4 373 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 MKKSQ9NPJ1 570 aaPredicted RBP4.84□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF275Q9NSD4 429 aaPredicted RBP4.84□□□□□ -1.64
SCN11A-202ENST00000444237 ZCCHC3Q9NUD5 404 aaKnown RBP4.84□□□□□ -1.64
SCN11A-202ENST00000444237 GPR160Q9UJ42 338 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 MED31Q9Y3C7 131 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 V9GY05 133 aa4.84□□□□□ -1.64
SCN11A-202ENST00000444237 UNC119BA6NIH7 251 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 OR5K4A6NMS3 321 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 DBX1A6NMT0 343 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RNASEK-C17orf49H0YIS7 233 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF593O00488 134 aaPredicted RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PQBP1O60828 265 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SLC16A8O95907 504 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 GABRA1P14867 456 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 BPIP17213 487 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PBX2P40425 430 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 TLE3Q04726 772 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF763Q0D2J5 394 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ILKQ13418 452 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 NFATC4Q14934 902 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RAB30Q15771 203 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PABPC1L2AQ5JQF8 200 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 MLIPQ5VWP3 458 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PLBD1Q6P4A8 553 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 KLHDC1Q8N7A1 406 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PLA2G15Q8NCC3 412 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 CCDC54Q8NEL0 328 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 POC1BQ8TC44 478 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 HGDQ93099 445 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 FAM46BQ96A09 425 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 MOAP1Q96BY2 351 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 CNN2Q99439 309 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 NSUN3Q9H649 340 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 BTNL2Q9UIR0 455 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 MRPS23Q9Y3D9 190 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 V9GYH0 126 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 HMX2A2RU54 273 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 MCRIP1C9JLW8 97 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PPP5D1E7EU14 171 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 DCTN6O00399 190 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RTCAO00442 366 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 TREHO43280 583 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 KDELR3O43731 214 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 STBD1O95210 358 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 OLFM2O95897 454 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 F2P00734 622 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SOX2P48431 317 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ERVPABLB-1P60509 514 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RELQ04864 619 aaPredicted RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PCBP2Q15366 365 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SOWAHAQ2M3V2 549 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 LGALSLQ3ZCW2 172 aaPredicted RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 UNC5DQ6UXZ4 953 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SLC35D2Q76EJ3 337 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 C16orf59Q7L2K0 433 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 TMEM173Q86WV6 379 aaPredicted RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RASGEF1AQ8N9B8 481 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF248Q8NDW4 579 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 OR2AK2Q8NG84 335 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 GPR152Q8TDT2 470 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 TEX101Q9BY14 249 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 WWTR1Q9GZV5 400 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SHARPINQ9H0F6 387 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 FAM96BQ9Y3D0 163 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 BACE2Q9Y5Z0 518 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SLCO1B1Q9Y6L6 691 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 CCDC88AQ3V6T2 1871 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 C17orf102A2RUQ5 167 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SYPP08247 313 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RNF224P0DH78 156 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 SNRPBP14678 240 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 GRM5P41594 1212 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 NSG1P42857 185 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RAD52P43351 418 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 RPL29P47914 159 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PCBP4P57723 403 aaKnown RBP4.83□□□□□ -1.64
SCN11A-202ENST00000444237 DOC2AQ14183 400 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ARHGAP11BQ3KRB8 267 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 NCMAPQ5T1S8 102 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 FUT10Q6P4F1 479 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 TFAP2EQ6VUC0 442 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 C15orf39Q6ZRI6 1047 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 OTOP2Q7RTS6 562 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 OR2W3Q7Z3T1 314 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 ASPGQ86U10 573 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 C17orf64Q86WR6 236 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 FNDC9Q8TBE3 224 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 FAM110BQ8TC76 370 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 PHYHIPQ92561 330 aa4.83□□□□□ -1.64
SCN11A-202ENST00000444237 COL26A1Q96A83 441 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms