RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 THSD4Q6ZMP0 1018 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF551Q7Z340 670 aaPredicted RBP12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SVOPLQ8N434 492 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 C17orf78Q8N4C9 275 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SLC16A11Q8NCK7 471 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 OR52E4Q8NGH9 312 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
LINC00642-202ENST00000442515 GIMAP5Q96F15 307 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 OTUB1Q96FW1 271 aaPredicted RBP12.14□□□□□ -0.47
LINC00642-202ENST00000442515 OR5B2Q96R09 309 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SAP130Q9H0E3 1048 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 RAB1BQ9H0U4 201 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SLC17A5Q9NRA2 495 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 CA10Q9NS85 328 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 CARD8Q9Y2G2 431 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 AMDHD2Q9Y303 409 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SPEF1Q9Y4P9 236 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 B4DSR2 109 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 ULK1O75385 1050 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 NTF4P34130 210 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 PRKAG1P54619 331 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 MRPS25P82663 173 aaKnown RBP12.13□□□□□ -0.47
LINC00642-202ENST00000442515 PDK3Q15120 406 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 RASA2Q15283 850 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 NDUFAF6Q330K2 333 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 SZRD1Q7Z422 152 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
LINC00642-202ENST00000442515 COX18Q8N8Q8 333 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 C1orf162Q8NEQ5 155 aaPredicted RBP12.13□□□□□ -0.47
LINC00642-202ENST00000442515 GPR119Q8TDV5 335 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 C1QTNF3Q9BXJ4 246 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 PLK3Q9H4B4 646 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 HIF1ANQ9NWT6 349 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 PCDHB14Q9Y5E9 798 aa12.13□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF716A6NP11 495 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 A8MT66 165 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
LINC00642-202ENST00000442515 PDE5AO76074 875 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 OR4A8P0C604 315 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 EPHA1P21709 976 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 GPC1P35052 558 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 HSD17B3P37058 310 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 SERPINB4P48594 390 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 DIO1P49895 249 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 CLCQ05315 142 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 RIN1Q13671 783 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 EFNB3Q15768 340 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 UAP1Q16222 522 aaPredicted RBP12.12□□□□□ -0.47
LINC00642-202ENST00000442515 SLC25A53Q5H9E4 307 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 VHLLQ6RSH7 139 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 NUP43Q8NFH3 380 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 MS4A4EQ96PG1 132 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 SIRT5Q9NXA8 310 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 GIN1Q9NXP7 522 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 DCTN4Q9UJW0 460 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 VWFP04275 2813 aa12.12□□□□□ -0.47
LINC00642-202ENST00000442515 ETV2O00321 342 aaPredicted RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 IFNGR1P15260 489 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 HMOX2P30519 316 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 CSNK2A1P68400 391 aaPredicted RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 QPRTQ15274 297 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 TMPPEQ6ZT21 453 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 IKBIPQ70UQ0 350 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF786Q8N393 782 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF527Q8NB42 609 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 CEP70Q8NHQ1 597 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 RFWD2Q8NHY2 731 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 METTL6Q8TCB7 284 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 C16orf58Q96GQ5 468 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF382Q96SR6 550 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 LPAR2Q9HBW0 351 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 GRIP1Q9Y3R0 1128 aa12.11□□□□□ -0.47
LINC00642-202ENST00000442515 POLR3HQ9Y535 204 aaPredicted RBP12.11□□□□□ -0.47
LINC00642-202ENST00000442515 IGHV1-18A0A0C4DH31 117 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 SULT2B1O00204 365 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 HSPA4LO95757 839 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
LINC00642-202ENST00000442515 ALOX5P09917 674 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 DDX5P17844 614 aaKnown RBP12.1□□□□□ -0.47
LINC00642-202ENST00000442515 MAGEA4P43358 317 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 MAGEA12P43365 314 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 CCR4P51679 360 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 PRPS1P60891 318 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 POU6F2P78424 691 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms