RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PAQR9Q6ZVX9 377 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CREB3L2Q70SY1 520 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 FCRLAQ7L513 359 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ISCA2Q86U28 154 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CACUL1Q86Y37 369 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 HIPK1Q86Z02 1210 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CBWD2Q8IUF1 395 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 RBM45Q8IUH3 476 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCDC50Q8IVM0 306 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRRC75A-AS1Q8N1F1 130 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ELMOD1Q8N336 334 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 NECAB1Q8N987 351 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 GIPC3Q8TF64 312 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SORCS1Q8WY21 1168 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 NTAN1Q96AB6 310 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF578Q96N58 590 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TAAR1Q96RJ0 339 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 KRT12Q99456 494 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TSC22D3Q99576 134 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LPAR4Q99677 370 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 NAT9Q9BTE0 207 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TEKT3Q9BXF9 490 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TOLLIPQ9H0E2 274 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB1BQ9H0U4 201 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR51B5Q9H339 312 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 GOLPH3Q9H4A6 298 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 MEAF6Q9HAF1 191 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 APMAPQ9HDC9 416 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 C19orf12Q9NSK7 152 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PARVAQ9NVD7 372 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC17A7Q9P2U7 560 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDH9Q9ULB4 789 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 STARD10Q9Y365 291 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF175Q9Y473 711 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRRC7Q96NW7 1537 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 KDM5BQ9UGL1 1544 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 UHRF1BP1LA0JNW5 1464 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PTPRUQ92729 1446 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 AK9Q5TCS8 1911 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 A0A087WZ39 114 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM238C9JI98 176 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ANHXE9PGG2 379 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PRAMEF26H0Y7S4 382 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TOR1AO14656 332 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 INSIG1O15503 277 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 KDELR3O43731 214 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 UPK3AO75631 287 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 NDUFA7O95182 113 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZBTB11O95625 1053 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLPIP03973 132 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 UMODP07911 640 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 DAOP14920 347 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF26P17031 533 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TSPAN8P19075 237 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 MX1P20591 662 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 IL12BP29460 328 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SERPINB1P30740 379 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 YWHABP31946 246 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 EPHX2P34913 555 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 MMP12P39900 470 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ACTR1BP42025 376 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CAPZBP47756 277 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 HOXA1P49639 335 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 BACE1P56817 501 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 C1QTNF8P60827 252 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CXCR4P61073 352 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 HERV-K104P61576 105 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PPIAP62937 165 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TSPAN31Q12999 210 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SELPLGQ14242 412 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCDC58Q4VC31 144 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 COQ5Q5HYK3 327 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 FGD3Q5JSP0 725 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 BRMS1LQ5PSV4 323 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 C1orf146Q5VVC0 180 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF549Q6P9A3 640 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 METTL7BQ6UX53 244 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PIGZQ86VD9 579 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PLA2G4DQ86XP0 818 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCDC185Q8N715 623 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR4D6Q8NGJ1 314 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR4C3Q8NH37 302 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR1L3Q8NH93 324 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ACTL9Q8TC94 416 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 MCOLN3Q8TDD5 553 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 APOBEC4Q8WW27 367 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLCO2A1Q92959 643 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 RTP4Q96DX8 246 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SENP5Q96HI0 755 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CASD1Q96PB1 797 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SORCS2Q96PQ0 1159 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ACCSQ96QU6 501 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM175Q9BSA9 504 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CHRDL1Q9BU40 450 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC22A4Q9H015 551 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SAV1Q9H4B6 383 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 C3orf14Q9HBI5 128 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 S100A14Q9HCY8 104 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 GDF3Q9NR23 364 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 MED17Q9NVC6 651 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms