RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PRR22Q8IZ63 422 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 GALNT15Q8N3T1 639 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 GATSQ8NAP1 163 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PSD4Q8NDX1 1056 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 FAM71CQ8NEG0 241 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ANKK1Q8NFD2 765 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 OR4C3Q8NH37 302 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 B4GALNT2Q8NHY0 566 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ZNF582Q96NG8 517 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 TAAR9Q96RI9 348 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 EDEM2Q9BV94 578 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 RSPO3Q9BXY4 272 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 SEMA4CQ9C0C4 833 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DSN1Q9H410 356 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 GPN2Q9H9Y4 310 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 AMBNQ9NP70 447 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SLC22A11Q9NSA0 550 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 GPR83Q9NYM4 423 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PPIEQ9UNP9 301 aaKnown RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 LOXL2Q9Y4K0 774 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 VGLL3A8MV65 326 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 KDM4EB2RXH2 506 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 AGRPO00253 132 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 IDH3BO43837 385 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ICOSLGO75144 302 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 INMTO95050 263 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ZNF806P0C7X5 589 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DBTP11182 482 aaKnown RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 PAX7P23759 505 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DGUOKQ16854 277 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 GTF2IRD2BQ6EKJ0 949 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 XAF1Q6GPH4 301 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ACSM5Q6NUN0 579 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 GTF2IRD2Q86UP8 949 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 KIF18BQ86Y91 864 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DND1Q8IYX4 353 aaKnown RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 OR5W2Q8NH69 310 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 UBE2FQ969M7 185 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 OTULINQ96BN8 352 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 RNFT2Q96EX2 444 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DOK1Q99704 481 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PRRX2Q99811 253 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 CTRCQ99895 268 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 FAM117AQ9C073 453 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 UBQLN3Q9H347 655 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PAK1IP1Q9NWT1 392 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 TAS2R10Q9NYW0 307 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 FLRT3Q9NZU0 649 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 AASSQ9UDR5 926 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DIMT1Q9UNQ2 313 aaKnown RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 CARD8Q9Y2G2 431 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PCDHGA1Q9Y5H4 931 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 CABIN1Q9Y6J0 2220 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 CCDC187A0A096LP49 1063 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SLC22A31A6NKX4 558 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SCO2O43819 266 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PRKYO43930 277 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 LYPD3O95274 346 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 HTR1AP08908 422 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 CD36P16671 472 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PCMT1P22061 227 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ACVR2AP27037 513 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SLC1A3P43003 542 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 MTNR1AP48039 350 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 RNF144AP50876 292 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 P2RX1P51575 399 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 RPS7P62081 194 aaKnown RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 ROR2Q01974 943 aaKnown RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 C17orf67Q0P5P2 114 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 POU4F2Q12837 409 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SKP2Q13309 424 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 MFSD13AQ14CX5 517 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SYT14P1Q58G82 188 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 NXNL2Q5VZ03 156 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ZNF385CQ66K41 422 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 SLC30A6Q6NXT4 461 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 OPN5Q6U736 354 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 C6orf15Q6UXA7 325 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 DBX2Q6ZNG2 339 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ADCK1Q86TW2 530 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 LAPTM4BQ86VI4 370 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 LNX2Q8N448 690 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ZNF321PQ8N8H1 164 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 ZNF441Q8N8Z8 693 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PROKR2Q8NFJ6 384 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 OR13C2Q8NGS9 318 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PFN4Q8NHR9 129 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 C3orf49Q96BT1 292 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 DDA1Q9BW61 102 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 FUNDC2Q9BWH2 189 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SMOC1Q9H4F8 434 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 FGF20Q9NP95 211 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 NCDNQ9UBB6 729 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 PADI1Q9ULC6 663 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 SPIN1Q9Y657 262 aaPredicted RBP5.53□□□□□ -1.52
VPS50-205ENST00000441602 R4GN57 208 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 TECTAO75443 2155 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 UNC13CQ8NB66 2214 aa5.53□□□□□ -1.52
VPS50-205ENST00000441602 H3BMQ9 156 aa5.52□□□□□ -1.53
VPS50-205ENST00000441602 M0R129 80 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms