RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 OLIG1Q8TAK6 271 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 PRMT6Q96LA8 375 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-206ENST00000441438 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 ULBP2Q9BZM5 246 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 CPNE5Q9HCH3 593 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 SLC7A11Q9UPY5 501 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 OAS3Q9Y6K5 1087 aaKnown RBP9.73□□□□□ -0.85
SYNE2-206ENST00000441438 LOC100509620A0A075B734 347 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 LEFTY2O00292 366 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 PET100P0DJ07 73 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 FCGR1AP12314 374 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 ARSAP15289 507 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 PAX6P26367 422 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 NR4A2P43354 598 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 RPL21P46778 160 aaKnown RBP9.73□□□□□ -0.85
SYNE2-206ENST00000441438 UCNP55089 124 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 MESP2Q0VG99 397 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
SYNE2-206ENST00000441438 HAGHQ16775 308 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 PPM1LQ5SGD2 360 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 SYCE2Q6PIF2 218 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 OTOP2Q7RTS6 562 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 CLDN22Q8N7P3 220 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 WDR36Q8NI36 951 aaKnown RBP9.73□□□□□ -0.85
SYNE2-206ENST00000441438 RPL3LQ92901 407 aaKnown RBP9.73□□□□□ -0.85
SYNE2-206ENST00000441438 RIT1Q92963 219 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 G6PC3Q9BUM1 346 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 ZNF426Q9BUY5 554 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 NMNAT2Q9BZQ4 307 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 XPNPEP3Q9NQH7 507 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 ATG4BQ9Y4P1 393 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PLIN3O60664 434 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 CEACAM8P31997 349 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PPT1P50897 306 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 CYP2J2P51589 502 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 F2RL1P55085 397 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 UBE2KP61086 200 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 RAP1BP61224 184 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.85
SYNE2-206ENST00000441438 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 CBWD6Q4V339 395 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 CBWD3Q5JTY5 395 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 SYPL2Q5VXT5 272 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM198Q66K66 360 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 TEX38Q6PEX7 206 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 CMTM8Q8IZV2 173 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM123Q8N131 208 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 Q8N402 240 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 LRRC75AQ8NAA5 344 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PIGXQ8TBF5 258 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 KLF6Q99612 283 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-206ENST00000441438 SLC30A3Q99726 388 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 TIMM29Q9BSF4 260 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 MAP1LC3CQ9BXW4 147 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 CTDSP1Q9GZU7 261 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PORCNQ9H237 461 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 SAR1AQ9NR31 198 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 ZDHHC8Q9ULC8 765 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PIGLQ9Y2B2 252 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 ZNF337Q9Y3M9 751 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM150BA6NC51 233 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 RAB29O14966 203 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 SC5DO75845 299 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PRDX2P32119 198 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 TAS2R39P59534 338 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 RANP62826 216 aaKnown RBP9.72□□□□□ -0.85
SYNE2-206ENST00000441438 LCN2P80188 198 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 IER5Q5VY09 327 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 YAF2Q8IY57 180 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 AMER3Q8N944 861 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 B3GNT7Q8NFL0 401 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 FBLIM1Q8WUP2 373 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PIH1D2Q8WWB5 315 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 PIGCQ92535 297 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 C1GALT1Q9NS00 363 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 ELF5Q9UKW6 265 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-206ENST00000441438 B3GNT3Q9Y2A9 372 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 ENTPD2Q9Y5L3 495 aa9.72□□□□□ -0.85
SYNE2-206ENST00000441438 DFFAO00273 331 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 KPNA4O00629 521 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SCDO00767 359 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 CYB561D2O14569 222 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 IGF2P01344 180 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 TAC1P20366 129 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 HTR2AP28223 471 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 RBMS1P29558 406 aaKnown RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SLC6A1P30531 599 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ARR3P36575 388 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 HIF1AQ16665 826 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 LETMD1Q6P1Q0 360 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 TFAP2EQ6VUC0 442 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 FAM98AQ8NCA5 519 aaKnown RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SFT2D1Q8WV19 159 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 WBP2Q969T9 261 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SLCO4A1Q96BD0 722 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SMIM12Q96EX1 92 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 COQ2Q96H96 371 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ZIC5Q96T25 663 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms