RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 WI2-2373I1.2A0A1W2PRP0 233 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 E7ESA3 106 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 ABCD4O14678 606 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 NOL3O60936 208 aaKnown RBP3.32□□□□□ -1.88
PFDN4-202ENST00000441080 PEX11AO75192 247 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 BCAS1O75363 584 aaPredicted RBP3.32□□□□□ -1.88
PFDN4-202ENST00000441080 ECI2O75521 394 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 BBOX1O75936 387 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 LRATO95237 230 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 DRD5P21918 477 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 CA8P35219 290 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 TLE4Q04727 773 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 CCDC173Q0VFZ6 552 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 MXD4Q14582 209 aaPredicted RBP3.32□□□□□ -1.88
PFDN4-202ENST00000441080 SLC36A3Q495N2 470 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 FAM71F2Q6NXP2 309 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 CCDC137Q6PK04 289 aaKnown RBP3.32□□□□□ -1.88
PFDN4-202ENST00000441080 UNQ9370/PRO34162Q6UXP9 181 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 FAM220AQ7Z4H9 259 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 TCTEX1D2Q8WW35 142 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 OR1E3Q8WZA6 343 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 FAM3CQ92520 227 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 RPL3LQ92901 407 aaKnown RBP3.32□□□□□ -1.88
PFDN4-202ENST00000441080 ELSPBP1Q96BH3 223 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 MAGT1Q9H0U3 335 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 RIBC2Q9H4K1 309 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 NARFLQ9H6Q4 476 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 ZDHHC11Q9H8X9 412 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 TMOD2Q9NZR1 351 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 CHRNA9Q9UGM1 479 aa3.32□□□□□ -1.88
PFDN4-202ENST00000441080 NAP1L2Q9ULW6 460 aaPredicted RBP3.32□□□□□ -1.88
PFDN4-202ENST00000441080 TTC21BQ7Z4L5 1316 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 NPIPA7E9PJI5 369 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 ZNF861PO60384 105 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 TPST2O60704 377 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 KRT8P05787 483 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 HPNP05981 417 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 NPIPA8P0DM63 369 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 DESP17661 470 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 ATP6V1C1P21283 382 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 LEPP41159 167 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 CKAP4Q07065 602 aaKnown RBP3.31□□□□□ -1.88
PFDN4-202ENST00000441080 GGTA1PQ4G0N0 100 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 ATL3Q6DD88 541 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 KCNIP4Q6PIL6 250 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 IL34Q6ZMJ4 242 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 VRK2Q86Y07 508 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 CCDC71LQ8N9Z2 235 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 OR52I1Q8NGK6 324 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 THRSPQ92748 146 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 DTNBP1Q96EV8 351 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 SLC35A5Q9BS91 424 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 SPATA16Q9BXB7 569 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 RHBGQ9H310 441 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 ELOVL3Q9HB03 270 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 SH2D2AQ9NP31 389 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 PALMDQ9NP74 551 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 BTNL2Q9UIR0 455 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 NPIPA1Q9UND3 350 aa3.31□□□□□ -1.88
PFDN4-202ENST00000441080 VSTM2BA6NLU5 285 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 TRIM49D1C9J1S8 452 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SUPT7LO94864 414 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 KRT6AP02538 564 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 PTMAP06454 111 aaKnown RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 HSPA5P11021 654 aaKnown RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 UQCRC2P22695 453 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 PAX7P23759 505 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 YWHABP31946 246 aaKnown RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 HSPA2P54652 639 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 ELP6Q0PNE2 266 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SNTB2Q13425 540 aaKnown RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SELPLGQ14242 412 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SYPL1Q16563 259 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 PDK4Q16654 411 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 TRIM16LQ309B1 348 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 ARMCX2Q7L311 632 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 MOB3BQ86TA1 216 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 ZDHHC21Q8IVQ6 265 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SVOPLQ8N434 492 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 RNF175Q8N4F7 328 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 DNAJA4Q8WW22 397 aaPredicted RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 CTNNBL1Q8WYA6 563 aaPredicted RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 RAPGEF5Q92565 580 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 MRPS31Q92665 395 aaKnown RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SYAP1Q96A49 352 aaPredicted RBP3.3□□□□□ -1.88
PFDN4-202ENST00000441080 TMEM101Q96IK0 257 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 PGLYRP4Q96LB8 373 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 ARHGDIGQ99819 225 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 OMDQ99983 421 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 GAL3ST1Q99999 423 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 KLHDC3Q9BQ90 382 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 ALG12Q9BV10 488 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SMYD3Q9H7B4 428 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 NUDT15Q9NV35 164 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 SIGLEC8Q9NYZ4 499 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms