RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TMEM245Q9H330 911 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 DPEP2Q9H4A9 486 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLK3Q9H4B4 646 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 RAD21L1Q9H4I0 556 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 EHD1Q9H4M9 534 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 KLHL31Q9H511 634 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 REEP4Q9H6H4 257 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TPT1P8Q9HAU6 139 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRPV4Q9HBA0 871 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 TM9SF3Q9HD45 589 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 PRSS16Q9NQE7 514 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ATAD3AQ9NVI7 634 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 DDX18Q9NVP1 670 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 GDE1Q9NZC3 331 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 AHSPQ9NZD4 102 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 THAP10Q9P2Z0 257 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ATXN10Q9UBB4 475 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF282Q9UDV7 671 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ATP6V1HQ9UI12 483 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 C3orf18Q9UK00 162 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 WBP11Q9Y2W2 641 aaKnown RBP3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 GMEB1Q9Y692 573 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 AP1M2Q9Y6Q5 423 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANAPC1Q9H1A4 1944 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 LOC102723996A0A087X1L8 192 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRBV5-7A0A0A0MS05 114 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 LOC100130705A0A1B0GUX0 176 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 C1orf226A1L170 272 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 INAFM1C9JVW0 142 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 STMND1H3BQB6 276 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 hCG_2039718K7EN88 272 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 SAP18O00422 153 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLK4O00444 970 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 KMOO15229 486 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PCDH7O60245 1069 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 DPM1O60762 260 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 KCNJ13O60928 360 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 MITFO75030 526 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 NKX2-2O95096 273 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 KRT75O95678 551 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 C6orf47O95873 294 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 SEMG1P04279 462 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 RPN2P04844 631 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 CA3P07451 260 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 DAOP14920 347 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 MYOGP15173 224 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 DDX5P17844 614 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PRKACGP22612 351 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 CRHBPP24387 322 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 EEF1B2P24534 225 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 DCKP27707 260 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ELK4P28324 431 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 TEAD1P28347 426 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 SERPINB1P30740 379 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 SHMT2P34897 504 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PCGF2P35227 344 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 POLR2IP36954 125 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 OPRD1P41143 372 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 P2RY2P41231 377 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 YAP1P46937 504 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 NUDT6P53370 316 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 IST1P53990 364 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 GABARAPL2P60520 117 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ISL1P61371 349 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 CD47Q08722 323 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBBP4Q09028 425 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF763Q0D2J5 394 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 GRSF1Q12849 480 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 CNTN1Q12860 1018 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PPP1R8Q12972 351 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 SNTB1Q13884 538 aaKnown RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PDE7AQ13946 482 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 NFE2L1Q14494 772 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ARHGAP19Q14CB8 494 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 RGNQ15493 299 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 NEDD8Q15843 81 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 MEP1AQ16819 746 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PCGF3Q3KNV8 242 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ODF3L2Q3SX64 289 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 LRRC23Q53EV4 343 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 C6orf141Q5SZD1 244 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 GCNT6Q5T4J0 391 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 PIP5KL1Q5T9C9 394 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF691Q5VV52 312 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM268Q5VZI3 342 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 KDM4DQ6B0I6 523 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM71E1Q6IPT2 247 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADNP2Q6IQ32 1131 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANKRD26P1Q6NSI1 321 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRIM40Q6P9F5 258 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRAT1Q6PIZ9 186 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF773Q6PK81 442 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 GSG1LQ6UXU4 331 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMIGD1Q6UXZ0 262 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 COMMD6Q7Z4G1 85 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADGRD2Q7Z7M1 963 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 WDR5BQ86VZ2 330 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 CYP4Z1Q86W10 505 aa3.17□□□□□ -1.9
HMGB3P11-201ENST00000440127 C17orf64Q86WR6 236 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms