RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 C17orf47Q8NEP4 570 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 OR1N1Q8NGS0 311 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 CEP76Q8TAP6 659 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 C3orf49Q96BT1 292 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SH3YL1Q96HL8 342 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-202ENST00000439724 GAL3ST4Q96RP7 486 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SLC19A3Q9BZV2 496 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SLC7A5P2Q9GIP4 190 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 ENKD1Q9H0I2 346 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 ZBTB20Q9HC78 741 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-202ENST00000439724 FBXO8Q9NRD0 319 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 CMC2Q9NRP2 79 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 NDUFB11Q9NX14 153 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 CHCHD3Q9NX63 227 aaKnown RBP10.81□□□□□ -0.68
SMAD3-202ENST00000439724 CCDC59Q9P031 241 aaKnown RBP10.81□□□□□ -0.68
SMAD3-202ENST00000439724 IL20RAQ9UHF4 553 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 RARRES3Q9UL19 164 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 A3GALT2U3KPV4 340 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 HEATR5AQ86XA9 2040 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 SEC16AO15027 2179 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 PRUNE2Q8WUY3 3088 aa10.81□□□□□ -0.68
SMAD3-202ENST00000439724 PRKNO60260 465 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-202ENST00000439724 TSPAN2O60636 221 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 PPM1BO75688 479 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 CER1O95813 267 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 IGF2P01344 180 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 IGHA1P01876 353 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 HPGDP15428 266 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 SLC6A6P31641 620 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 OPRL1P41146 370 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 SLC9A3P48764 834 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 WNT4P56705 351 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 FOXK2Q01167 660 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 CRYZQ08257 329 aaKnown RBP10.8□□□□□ -0.68
SMAD3-202ENST00000439724 TMED1Q13445 227 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 FHL1Q13642 323 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 ARMC4Q5T2S8 1044 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 WBP2NLQ6ICG8 309 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 NIPAL3Q6P499 406 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 SLC29A4Q7RTT9 530 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 OAFQ86UD1 273 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 CPOQ8IVL8 374 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 PRSS58Q8IYP2 241 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 ZNF441Q8N8Z8 693 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 OR6Q1Q8NGQ2 317 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 OR9Q1Q8NGQ5 310 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 STT3BQ8TCJ2 826 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 S100ZQ8WXG8 99 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 SGTBQ96EQ0 304 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 HSPBAP1Q96EW2 488 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 CCDC74BQ96LY2 380 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 OR6C1Q96RD1 312 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 CHCHD6Q9BRQ6 235 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 CENPOQ9BU64 300 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 IFT27Q9BW83 186 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 WWTR1Q9GZV5 400 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 MCCC2Q9HCC0 563 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 AKIP1Q9NQ31 210 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 H2AFY2Q9P0M6 372 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-202ENST00000439724 SEC14L4Q9UDX3 406 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 FBXO4Q9UKT5 387 aa10.8□□□□□ -0.68
SMAD3-202ENST00000439724 TRAV27A0A087WT01 109 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 LOC100506127A0A0U1RQW1 187 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 A0A1W2PQD3 144 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 METTL15A6NJ78 407 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 CLDN25C9JDP6 229 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 ZNF264O43296 627 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 OIP5O43482 229 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 REM1O75628 298 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 LIMS3P0CW19 117 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 LIMS4P0CW20 117 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 CPEP16870 476 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 SOX3P41225 446 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 SLC1A3P43003 542 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 ZNF846Q147U1 533 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 NKAIN1Q4KMZ8 207 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 ZNF385CQ66K41 422 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-202ENST00000439724 ARHGAP11AQ6P4F7 1023 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 RTL4Q6ZR62 310 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 LANCL3Q6ZV70 420 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 SLC15A4Q8N697 577 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 AMER2Q8N7J2 671 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 ZNF485Q8NCK3 441 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 PSD4Q8NDX1 1056 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 BBS1Q8NFJ9 593 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 OR51A7Q8NH64 312 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 IFI44Q8TCB0 444 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 PHOSPHO1Q8TCT1 267 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 LRFN5Q96NI6 719 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 TNFRSF13CQ96RJ3 184 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 WDR12Q9GZL7 423 aaKnown RBP10.79□□□□□ -0.68
SMAD3-202ENST00000439724 NXF2Q9GZY0 626 aaKnown RBP10.79□□□□□ -0.68
SMAD3-202ENST00000439724 LAT2Q9GZY6 243 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 HMG20AQ9NP66 347 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 STUB1Q9UNE7 303 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 CARD8Q9Y2G2 431 aa10.79□□□□□ -0.68
SMAD3-202ENST00000439724 TECTAO75443 2155 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms