RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB3P12-201ENST00000438745 NINJ2Q9NZG7 142 aa2.53□□□□□ -2
HMGB3P12-201ENST00000438745 NYAP2Q9P242 653 aa2.53□□□□□ -2
HMGB3P12-201ENST00000438745 EMCNQ9ULC0 261 aa2.53□□□□□ -2
HMGB3P12-201ENST00000438745 RNF24Q9Y225 148 aa2.53□□□□□ -2
HMGB3P12-201ENST00000438745 FKBP7Q9Y680 259 aa2.53□□□□□ -2
HMGB3P12-201ENST00000438745 KIF26AQ9ULI4 1882 aaPredicted RBP2.53□□□□□ -2
HMGB3P12-201ENST00000438745 LAMA4Q16363 1823 aa2.53□□□□□ -2
HMGB3P12-201ENST00000438745 ASCC3Q8N3C0 2202 aaKnown RBP2.53□□□□□ -2
HMGB3P12-201ENST00000438745 ABCA7Q8IZY2 2146 aa2.53□□□□□ -2.01
HMGB3P12-201ENST00000438745 IGLV3-10A0A075B6K4 115 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 A0A087WWV3 80 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 MYBPHLA2RUH7 354 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF840PA6NDX5 716 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 PCNX2A6NKB5 2137 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SAP18O00422 153 aaKnown RBP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 GPRIN2O60269 458 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF354AO60765 605 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SEC22BO75396 215 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 PDE5AO76074 875 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 NUDT14O95848 222 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 TGFAP01135 160 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 CD99P14209 185 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ACP1P24666 158 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ELK3P41970 407 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 UQCRFS1P47985 274 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SLC11A1P49279 550 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SGSHP51688 502 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ARHGDIAP52565 204 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 HAND2P61296 217 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 TRA2BP62995 288 aaKnown RBP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 MYBPC1Q00872 1141 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF33AQ06730 810 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SLC10A1Q14973 349 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 LTB4RQ15722 352 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 C17orf58Q2M2W7 97 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 VWA2Q5GFL6 755 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 FAM78AQ5JUQ0 283 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 CLLU1OSQ5K130 101 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SPNS3Q6ZMD2 512 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 GPBP1Q86WP2 473 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ECHDC2Q86YB7 292 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 MFSD6LQ8IWD5 586 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 FGFRL1Q8N441 504 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 OR8H1Q8NGG4 311 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SDR42E1Q8WUS8 393 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 FCGR1BQ92637 280 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SMARCD2Q92925 531 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 LHX4Q969G2 390 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 NTNG2Q96CW9 530 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF414Q96IQ9 312 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 CNOT6LQ96LI5 555 aaKnown RBP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 CPXM1Q96SM3 734 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 FAM124BQ9H5Z6 455 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 TMEM231Q9H6L2 316 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ALG9Q9H6U8 611 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ESM1Q9NQ30 184 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 CUTCQ9NTM9 273 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRODH2Q9UF12 536 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 IL20RAQ9UHF4 553 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRG3Q9Y2Y8 225 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 C2orf16Q68DN1 1984 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 ICE1Q9Y2F5 2266 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 SVILO95425 2214 aa2.52□□□□□ -2.01
HMGB3P12-201ENST00000438745 FN1P02751 2386 aaKnown RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 SPTBN1Q01082 2364 aaKnown RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 OTOGQ6ZRI0 2925 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 RNF103-CHMP3A0A140T963 221 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 TRIM49BA6NDI0 452 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 PHOX2AO14813 284 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 ARPC1BO15143 372 aaKnown RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 CHADO15335 359 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 SRPX2O60687 465 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 SDC3O75056 442 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 RHBDL1O75783 438 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 STAM2O75886 525 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 PTBP3O95758 552 aaKnown RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 ECDO95905 644 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 PIGRP01833 764 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 KRT7P08729 469 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 CD1EP15812 388 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 TSPAN8P19075 237 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 PTPN4P29074 926 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 HOXA9P31269 272 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 PRDX2P32119 198 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 BNIP1Q12981 228 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 CDC37Q16543 378 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 TAF3Q5VWG9 929 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 IL23RQ5VWK5 629 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 PNCKQ6P2M8 343 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 CNSTQ6PJW8 725 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 KDM7AQ6ZMT4 941 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 ELMOD2Q8IZ81 293 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF619Q8N2I2 560 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 KDM8Q8N371 416 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 GMCL1P1Q8NEA9 526 aa2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 ZNF397Q8NF99 534 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P12-201ENST00000438745 BEST4Q8NFU0 473 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms