RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CSMD1Q96PZ7 3565 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 HEATR5AQ86XA9 2040 aa22.18■■□□□ 1.14
RAPGEF1-206ENST00000438647 CREBBPQ92793 2442 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 UQCRHLA0A096LP55 91 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 TUBAL3A6NHL2 446 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 CLIC1O00299 241 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 NCF2P19878 526 aaPredicted RBP22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 SLC7A1P30825 629 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 SESN3P58005 492 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 SIRPAP78324 504 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 TMEM176BQ3YBM2 270 aaPredicted RBP22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 AGKQ53H12 422 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 VWA1Q6PCB0 445 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 ZZZ3Q8IYH5 903 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 ZNF563Q8TA94 476 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 THOC1Q96FV9 657 aaKnown RBP22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 ACER3Q9NUN7 267 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 CRIM1Q9NZV1 1036 aa22.17■■□□□ 1.14
RAPGEF1-206ENST00000438647 EFNA2O43921 213 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 CD8BP10966 210 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 NID1P14543 1247 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 RPS4Y1P22090 263 aaKnown RBP22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 PPIBP23284 216 aaKnown RBP22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 SHC1P29353 583 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 CPOXP36551 454 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 SNTB1Q13884 538 aaKnown RBP22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 GUSBP1Q15486 140 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 LRIF1Q5T3J3 769 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 BTLAQ7Z6A9 289 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 HMGN2P46Q86SG4 172 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 ATP6V1C2Q8NEY4 427 aa22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 CACYBPQ9HB71 228 aaKnown RBP22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 SPIN1Q9Y657 262 aaPredicted RBP22.16■■□□□ 1.14
RAPGEF1-206ENST00000438647 A0A0G2JND7 137 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 CLDN24A6NM45 220 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 BCHEP06276 602 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 TFPTP0C1Z6 253 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 UQCRBP14927 111 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 RYKP34925 604 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 APOBEC1P41238 236 aaKnown RBP22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 PCYT1AP49585 367 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 CTBP2P56545 445 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 MERTKQ12866 999 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 RGNQ15493 299 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 ZNF239Q16600 458 aaKnown RBP22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 TMEM200AQ86VY9 491 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 SLC25A43Q8WUT9 341 aaPredicted RBP22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 SLC38A5Q8WUX1 472 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 ZNF524Q96C55 264 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 PROCRQ9UNN8 238 aa22.15■■□□□ 1.14
RAPGEF1-206ENST00000438647 TACC2O95359 2948 aa22.14■■□□□ 1.14
RAPGEF1-206ENST00000438647 DSPPQ9NZW4 1301 aa22.14■■□□□ 1.14
RAPGEF1-206ENST00000438647 A0A1W2PP18 115 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 SS18L1O75177 396 aaPredicted RBP22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 BCAS1O75363 584 aaPredicted RBP22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 TROVE2P10155 538 aaKnown RBP eCLIP22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 HOXB9P17482 250 aaPredicted RBP22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZSWIM7Q19AV6 140 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 LIN52Q52LA3 116 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 METTL21CQ5VZV1 264 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 PLEKHM3Q6ZWE6 761 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 GRINAQ7Z429 371 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 OR6K3Q8NGY3 331 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 CNOT9Q92600 299 aaKnown RBP22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 TMEM19Q96HH6 336 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 SLC39A3Q9BRY0 314 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 MED4Q9NPJ6 270 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 SLC52A3Q9NQ40 469 aa22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 DNAJB12Q9NXW2 375 aaKnown RBP22.14■■□□□ 1.13
RAPGEF1-206ENST00000438647 A0A0G2JPF8 293 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 HNRNPCL2B2RXH8 293 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 HNRNPCL3B7ZW38 293 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 HNRNPCL1O60812 293 aaKnown RBP22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 HNRNPCL4P0DMR1 293 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 BMP2P12643 396 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 FKBP2P26885 142 aaKnown RBP22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 HTR3AP46098 478 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 RAC3P60763 192 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 RNPS1Q15287 305 aaKnown RBP22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 MAPK11Q15759 364 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 PAGE3Q5JUK9 113 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 MRPL2Q5T653 305 aaKnown RBP22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 PRAMEF8Q5VWM4 474 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 PRAMEF7Q5VXH5 474 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF440Q8IYI8 595 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 OR52P1PQ8NH57 321 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 COQ10BQ9H8M1 238 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 MRGBPQ9NV56 204 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 ELOVL5Q9NYP7 299 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 PRDM4Q9UKN5 801 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 CORO2BQ9UQ03 480 aa22.13■■□□□ 1.13
RAPGEF1-206ENST00000438647 CSMD2Q7Z408 3487 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 CGAP01215 116 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 EPXP11678 715 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 KRTAP10-9P60411 292 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 PLAURQ03405 335 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 LARS2Q15031 903 aaKnown RBP22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 RNF128Q8TEB7 428 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 CCDC106Q9BWC9 280 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 SRXN1Q9BYN0 137 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms