RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SPEM2Q0P670 501 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 HSDL2Q6YN16 418 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 PRSS48Q7RTY5 328 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CPEB2Q7Z5Q1 589 aaKnown RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 RNF113BQ8IZP6 322 aaKnown RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 IPCEF1Q8WWN9 437 aaPredicted RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF524Q96C55 264 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 BPIFA2Q96DR5 249 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 BCL7BQ9BQE9 202 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 EDEM2Q9BV94 578 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 TSSK6Q9BXA6 273 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 EVA1AQ9H8M9 152 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ZBTB20Q9HC78 741 aaPredicted RBP19.36■□□□□ 0.69
PTPRF-207ENST00000436724 CCNB1IP1Q9NPC3 277 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 ACOT13Q9NPJ3 140 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 IL20Q9NYY1 176 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 MED31Q9Y3C7 131 aa19.36■□□□□ 0.69
PTPRF-207ENST00000436724 STSP08842 583 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 STAT5AP42229 794 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 PCYT1AP49585 367 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 TEKQ02763 1124 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 PRKCDQ05655 676 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 SKP2Q13309 424 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 ZSWIM7Q19AV6 140 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF554Q86TJ5 538 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 SLC34A3Q8N130 599 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 TMCO5AQ8N6Q1 288 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 OR8J1Q8NGP2 316 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 OR4Q3Q8NH05 313 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 SLC35B4Q969S0 331 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 LPAR4Q99677 370 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 FKBP14Q9NWM8 211 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 GPR52Q9Y2T5 361 aa19.35■□□□□ 0.69
PTPRF-207ENST00000436724 GTPBP1O00178 669 aaKnown RBP19.34■□□□□ 0.69
PTPRF-207ENST00000436724 CBFA2T3O75081 653 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ADRA2AP08913 450 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ADH7P40394 386 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 FXYD6P3P58550 94 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 RAB15P59190 212 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 SNAPC1Q16533 368 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ULK3Q6PHR2 472 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 TMEM205Q6UW68 189 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 FAM198BQ6UWH4 519 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 MARCH3Q86UD3 253 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 IGFN1Q86VF2 1251 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 GALNT6Q8NCL4 622 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF426Q9BUY5 554 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ENKD1Q9H0I2 346 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 KRCC1Q9NPI7 259 aaPredicted RBP19.34■□□□□ 0.69
PTPRF-207ENST00000436724 RPS6KB2Q9UBS0 482 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 TRBV11-1A0A0K0K1C0 115 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ZNF264O43296 627 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 MRPS14O60783 128 aaKnown RBP19.34■□□□□ 0.69
PTPRF-207ENST00000436724 SULT1C4O75897 302 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ST3GAL4Q11206 333 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 CENPSQ8N2Z9 138 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 OR5M3Q8NGP4 307 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 NDNFQ8TB73 568 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 SAMD8Q96LT4 415 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 POLDIP3Q9BY77 421 aaKnown RBP19.34■□□□□ 0.69
PTPRF-207ENST00000436724 SLC25A19Q9HC21 320 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 ERGIC3Q9Y282 383 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 LOXL2Q9Y4K0 774 aa19.34■□□□□ 0.69
PTPRF-207ENST00000436724 WWP2O00308 870 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 SLC22A1O15245 554 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 IDUAP35475 653 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 COPZ1P61923 177 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 LSM3P62310 102 aaKnown RBP19.33■□□□□ 0.69
PTPRF-207ENST00000436724 EFNB1P98172 346 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 LINC00114Q6XXX2 140 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 SUMF1Q8NBK3 374 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 C17orf47Q8NEP4 570 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 OR13C2Q8NGS9 318 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 CHPT1Q8WUD6 406 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 GPN3Q9UHW5 284 aaPredicted RBP19.33■□□□□ 0.69
PTPRF-207ENST00000436724 B3GNT3Q9Y2A9 372 aa19.33■□□□□ 0.69
PTPRF-207ENST00000436724 UNC119BA6NIH7 251 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 TMEM200CA6NKL6 621 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 CDK1P06493 297 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 SAGP10523 405 aaPredicted RBP19.33■□□□□ 0.68
PTPRF-207ENST00000436724 PSMB9P28065 219 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 PSMD7P51665 324 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 INSM1Q01101 510 aaPredicted RBP19.33■□□□□ 0.68
PTPRF-207ENST00000436724 ITGADQ13349 1161 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 SVOPQ8N4V2 548 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 OSTF1Q92882 214 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 LRR1Q96L50 414 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 OR52D1Q9H346 318 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 WDR54Q9H977 334 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 TAS2R16Q9NYV7 291 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 PPIEQ9UNP9 301 aaKnown RBP19.33■□□□□ 0.68
PTPRF-207ENST00000436724 CDH10Q9Y6N8 788 aa19.33■□□□□ 0.68
PTPRF-207ENST00000436724 SH3D21A4FU49 640 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 LCKP06239 509 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 MST1P26927 711 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 VBP1P61758 197 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF117Q03924 483 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 CRYZQ08257 329 aaKnown RBP19.32■□□□□ 0.68
PTPRF-207ENST00000436724 BTLAQ7Z6A9 289 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 P2RY8Q86VZ1 359 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms