RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SLC13A4Q9UKG4 626 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 ACAD8Q9UKU7 415 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CNOT11Q9UKZ1 510 aaKnown RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 A4GNTQ9UNA3 340 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC9A8Q9Y2E8 581 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CARD8Q9Y2G2 431 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 TESMINQ9Y4I5 508 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 CHCHD2Q9Y6H1 151 aaPredicted RBP6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 SDK2Q58EX2 2172 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 WDR87Q6ZQQ6 2873 aa6.42□□□□□ -1.38
LSM3P3-201ENST00000436601 PTPRBP23467 1997 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 A6NL46 340 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 B4DXG7 233 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 GTPBP1O00178 669 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 AP3D1O14617 1153 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF264O43296 627 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 LYPD3O95274 346 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ANGPTL1O95841 491 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SCGB1D2O95969 90 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 THY1P04216 161 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 UBTFL6P0CB48 400 aaPredicted RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 CCL3P10147 92 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 UBL4AP11441 157 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ITGA2P17301 1181 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 RHCEP18577 417 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 HTR2AP28223 471 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PEX2P28328 305 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 RRM2P31350 389 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 CD96P40200 585 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 CASP3P42574 277 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 LIMS1P48059 325 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PTDSS1P48651 473 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 TMED10P49755 219 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 HLCSP50747 726 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 HMGA2P52926 109 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 RRADP55042 308 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 RGS8P57771 180 aaPredicted RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SESN3P58005 492 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF117Q03924 483 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 EPS8Q12929 822 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PPP1R8Q12972 351 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 RAPSNQ13702 412 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 GANABQ14697 944 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 TRIP10Q15642 601 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SNCBQ16143 134 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 DEFB109BQ30KR1 87 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 TMEM177Q53S58 311 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ENTPD8Q5MY95 495 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 OGFRL1Q5TC84 451 aaPredicted RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 TBPL2Q6SJ96 375 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 MDGA2Q7Z553 956 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 THAP5Q7Z6K1 395 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SPACA3Q8IXA5 215 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 DND1Q8IYX4 353 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 TMEM156Q8N614 296 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PIK3C3Q8NEB9 887 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 OR4C15Q8NGM1 316 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PHOSPHO1Q8TCT1 267 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PAQR8Q8TEZ7 354 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 DUSP19Q8WTR2 217 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC35B4Q969S0 331 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SECISBP2Q96T21 854 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 MCHR1Q99705 422 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 FUZQ9BT04 418 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 BDH2Q9BUT1 245 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ANGPTL4Q9BY76 406 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 TBL1XR1Q9BZK7 514 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 LAT2Q9GZY6 243 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 EVA1AQ9H8M9 152 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 NMNAT1Q9HAN9 279 aaPredicted RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 PROK2Q9HC23 129 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 GALNT9Q9HCQ5 603 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 EXOSC3Q9NQT5 275 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 CTPS2Q9NRF8 586 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 MAN2C1Q9NTJ4 1040 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ACER3Q9NUN7 267 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 ICAM5Q9UMF0 924 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 POLHQ9Y253 713 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC35A3Q9Y2D2 325 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 FAM32AQ9Y421 112 aaKnown RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 MAGED1Q9Y5V3 778 aaPredicted RBP6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 U3KQV3 271 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 KIF26BQ2KJY2 2108 aa6.41□□□□□ -1.38
LSM3P3-201ENST00000436601 IGLV3-32A0A0A0MS00 114 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 SAC3D1A6NKF1 404 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 CPSF4LA6NMK7 179 aaKnown RBP6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 FAM47E-STBD1D6RA91 191 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 H3BNH8 94 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 PDLIM1O00151 329 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 GNGT2O14610 69 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 TP53I11O14683 189 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 WIPF1O43516 503 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 HCRTR2O43614 444 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 EIF4E2O60573 245 aaKnown RBP6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 FMO6PO60774 539 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 CEACAM4O75871 244 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 CYP7B1O75881 506 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 GADD45GO95257 159 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 NTN1O95631 604 aa6.4□□□□□ -1.38
LSM3P3-201ENST00000436601 WDPCPO95876 746 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms