RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SH2D4BQ5SQS7 431 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 TMEM108Q6UXF1 575 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 NUFIP2Q7Z417 695 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 TUSC5Q8IXB3 177 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 SLC43A2Q8N370 569 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 C1orf52Q8N6N3 182 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 ABHD3Q8WU67 409 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 KCTD4Q8WVF5 259 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 SELENOMQ8WWX9 145 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 MSI2Q96DH6 328 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 KLHL15Q96M94 604 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 BBS4Q96RK4 519 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 EML4Q9HC35 981 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 MED17Q9NVC6 651 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 FLRT3Q9NZU0 649 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 VPS29Q9UBQ0 182 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 POU2F3Q9UKI9 436 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 SNX12Q9UMY4 172 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 X6R8D5 127 aa7.4□□□□□ -1.22
NIF3L1-208ENST00000436412 WNK1Q9H4A3 2382 aa7.4□□□□□ -1.23
NIF3L1-208ENST00000436412 VWFP04275 2813 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 A0A0A6YYJ9 748 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 GNG14A0A1W2PPG7 69 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 GJE1A6NN92 205 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 MYO1GB0I1T2 1018 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 VWC2LB2RUY7 222 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 ZNF814B7Z6K7 855 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 E7EQL1 145 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 SLCO1B7G3V0H7 640 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 KIAA0513O60268 411 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PSMG1O95456 288 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 OTCP00480 354 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PDYNP01213 254 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 C2P06681 752 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 IL3P08700 152 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 IFI6P09912 130 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 DHRS4L1P0CG22 281 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 CTAGE8P0CG41 777 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 APEHP13798 732 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 GGT1P19440 569 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PTNP21246 168 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 GSTM5P46439 218 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 OR3A2P47893 321 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PDLIM4P50479 330 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 FABP6P51161 128 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 MANFP55145 182 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 STK11Q15831 433 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PLPPR5Q32ZL2 321 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 ARL13AQ5H913 290 aaPredicted RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 SLC22A25Q6T423 547 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 KLHL17Q6TDP4 642 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 APOOLQ6UXV4 268 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 ETV3LQ6ZN32 361 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 IL17RELQ6ZVW7 336 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 FCRLAQ7L513 359 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 MISPQ8IVT2 679 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 CTAGE4Q8IX94 777 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PPM1NQ8N819 430 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PTGR2Q8N8N7 351 aaPredicted RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 CDYL2Q8N8U2 506 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 ZNF540Q8NDQ6 660 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 OR4F6Q8NGB9 312 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 EXOSC8Q96B26 276 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 RNF145Q96MT1 663 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 GPR78Q96P69 363 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 LMF2Q9BU23 707 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 BCO1Q9HAY6 547 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 MYOZ1Q9NP98 299 aaPredicted RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 FARSBQ9NSD9 589 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 NTMQ9P121 344 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 CPSF2Q9P2I0 782 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 KLHL9Q9P2J3 617 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 PCTPQ9UKL6 214 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 GRID1Q9ULK0 1009 aa7.39□□□□□ -1.23
NIF3L1-208ENST00000436412 OR5H1A6NKK0 313 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 UPK1AO00322 258 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 RGS14O43566 566 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 LYZL6O75951 148 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 TGFAP01135 160 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 OPN1LWP04000 364 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 RBP1P09455 135 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 TCP1P17987 556 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 COX5AP20674 150 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 LCN1P31025 176 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 STX2P32856 288 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 NR4A2P43354 598 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 RFX3P48380 749 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 COMPP49747 757 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 CALCOCO2Q13137 446 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 GGTLC2Q14390 218 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 SLC29A2Q14542 456 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 CR1LQ2VPA4 569 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 GRAMD1BQ3KR37 738 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 VPS26BQ4G0F5 336 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 GLE1Q53GS7 698 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 SPIN4Q56A73 249 aa7.38□□□□□ -1.23
NIF3L1-208ENST00000436412 KLHL7Q8IXQ5 586 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms