RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 C19orf57Q0VDD7 668 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 MERTKQ12866 999 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 NPTX1Q15818 432 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 PLEKHM3Q6ZWE6 761 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 GEMIN6Q8WXD5 167 aaKnown RBP13.9□□□□□ -0.18
CNOT9-205ENST00000433439 SLC47A1Q96FL8 570 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 GPR137Q96N19 417 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 RAB3IPQ96QF0 476 aaPredicted RBP13.9□□□□□ -0.18
CNOT9-205ENST00000433439 ZNF559Q9BR84 538 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 TMEM185BQ9H7F4 350 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 TMEM27Q9HBJ8 222 aa13.9□□□□□ -0.18
CNOT9-205ENST00000433439 TESQ9UGI8 421 aaKnown RBP13.9□□□□□ -0.18
CNOT9-205ENST00000433439 SMG1Q96Q15 3661 aaKnown RBP13.9□□□□□ -0.18
CNOT9-205ENST00000433439 ITPR1Q14643 2758 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ATMQ13315 3056 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 A0A1B0GTH9 108 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 TCRBV5S2A0A599 114 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 OR2M5A3KFT3 312 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 hCG_2039718K7EN88 272 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 TPST2O60704 377 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 OPN1LWP04000 364 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 IFNW1P05000 195 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 PEPDP12955 493 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 NQO1P15559 274 aaKnown RBP13.89□□□□□ -0.19
CNOT9-205ENST00000433439 HTR2AP28223 471 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 TACR3P29371 465 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 STARP49675 285 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 OR1Q1Q15612 314 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 MTX3Q5HYI7 312 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 WBP2NLQ6ICG8 309 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 GFRALQ6UXV0 394 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 TRILQ7L0X0 811 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ZNF771Q7L3S4 317 aaPredicted RBP13.89□□□□□ -0.19
CNOT9-205ENST00000433439 POC1BQ8TC44 478 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ST8SIA1Q92185 356 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 SLC35B4Q969S0 331 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ZBTB8AQ96BR9 441 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 RSRC1Q96IZ7 334 aaKnown RBP13.89□□□□□ -0.19
CNOT9-205ENST00000433439 PIGQQ9BRB3 760 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 TRIM2Q9C040 744 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 AMBRA1Q9C0C7 1298 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ACKR4Q9NPB9 350 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 ACER3Q9NUN7 267 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 SELENONQ9NZV5 590 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 AURKCQ9UQB9 309 aa13.89□□□□□ -0.19
CNOT9-205ENST00000433439 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 J3KTA2 159 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 MT-ND1P03886 318 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 PTNP21246 168 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 EIF1P41567 113 aaKnown RBP13.88□□□□□ -0.19
CNOT9-205ENST00000433439 SLC1A3P43003 542 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 B3GALT5-AS1P59052 145 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 TAS2R41P59536 307 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 KCNC4Q03721 635 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 CHRNB3Q05901 458 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 ZNF324BQ6AW86 544 aaPredicted RBP13.88□□□□□ -0.19
CNOT9-205ENST00000433439 AAGABQ6PD74 315 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 GRINAQ7Z429 371 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 UBQLNLQ8IYU4 475 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 GHDCQ8N2G8 530 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 NEIL3Q8TAT5 605 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 ABTB1Q969K4 478 aaPredicted RBP13.88□□□□□ -0.19
CNOT9-205ENST00000433439 MRGPRX4Q96LA9 322 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 UGT2B28Q9BY64 529 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 MRPS18CQ9Y3D5 142 aaKnown RBP13.88□□□□□ -0.19
CNOT9-205ENST00000433439 ZNF337Q9Y3M9 751 aa13.88□□□□□ -0.19
CNOT9-205ENST00000433439 FAM32AQ9Y421 112 aaKnown RBP13.88□□□□□ -0.19
CNOT9-205ENST00000433439 TMED7-TICAM2A0A0A6YYA0 188 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 AQP12BA6NM10 295 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 NPIPA2E9PIF3 369 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 NPIPA3F8WFD2 350 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 FAAHO00519 579 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 SEC14L5O43304 696 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 HCN1O60741 890 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 DIRAS1O95057 198 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 IGHG3P01860 377 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 BMP7P18075 431 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 POU3F2P20265 443 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-205ENST00000433439 IL11P20809 199 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 CXCR1P25024 350 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 SFTPDP35247 375 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 TDGF1P3P51864 188 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 SRYQ05066 204 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 PIN1Q13526 163 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-205ENST00000433439 C3AR1Q16581 482 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 GLYR1Q49A26 553 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-205ENST00000433439 FAM98BQ52LJ0 330 aaKnown RBP13.87□□□□□ -0.19
CNOT9-205ENST00000433439 KRTCAP3Q53RY4 240 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 AQP12AQ8IXF9 295 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 GTPBP8Q8N3Z3 284 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-205ENST00000433439 ZNF843Q8N446 348 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 DNAJA3Q96EY1 480 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 SLX1AQ9BQ83 275 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 SERINC1Q9NRX5 453 aa13.87□□□□□ -0.19
CNOT9-205ENST00000433439 ALKBH4Q9NXW9 302 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms